Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C05
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    26   0.11 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    20   7.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.2  

>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 26.2 bits (55), Expect = 0.11
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 291 RLHLGEVDNITAVRGEFAIKKEVHEEYLTNDVNKIQYLTNKETERIKILRV 139
           RL   + + +  + G+FA K  V + +  ND N      +  TER K++R+
Sbjct: 96  RLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNS---FLHDVTERNKLVRL 143


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 5   LATYGKRGRVAASKCWSLISTA 70
           + T   R + + ++CWSL STA
Sbjct: 201 IETDSDRRKGSIARCWSLDSTA 222


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 281 SVKLTTSLPYVENSPSRK 228
           SV+L+ + PY  NSP ++
Sbjct: 891 SVQLSWAAPYDGNSPIKR 908


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = -3

Query: 270 DNITAVRGEFAIKKEVHEEYLTNDVNKIQYLTNKET 163
           +N     G   +KK    +Y  N    I+  +NK T
Sbjct: 91  ENKNCNAGSLTVKKNFANKYCGNITLNIESTSNKMT 126


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +1

Query: 115 VDYFHANLNTQNFYAFRFFICEVLNF 192
           ++Y H +L  +N       +C++ +F
Sbjct: 754 MNYVHRDLAARNVLVNAALVCKIADF 779


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,752
Number of Sequences: 438
Number of extensions: 1879
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)