Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_C04
(278 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 40 2e-04
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 36 0.006
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 36 0.006
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr... 30 0.21
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 28 0.86
U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical pr... 28 1.1
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ... 27 2.6
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 26 3.5
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 26 4.6
AL110485-28|CAD36500.1| 145|Caenorhabditis elegans Hypothetical... 26 4.6
AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical... 26 4.6
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 25 6.1
U97005-10|AAK72084.1| 646|Caenorhabditis elegans Hypothetical p... 25 6.1
U39648-2|AAM15606.1| 166|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 25 8.0
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 25 8.0
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical
protein F29G6.1 protein.
Length = 1170
Score = 40.3 bits (90), Expect = 2e-04
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2
Query: 110 PPPLCICGKIYSPVCGSDGKTYENPCEIFLRVKHDTQQ 223
PPP C C + PVCG+D TY N C FLR T +
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLC--FLRCVQRTNE 50
Score = 32.3 bits (70), Expect = 0.053
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEI 193
C K YSPVC S+G+ N CE+
Sbjct: 872 CPKEYSPVCASNGQNIVNECEL 893
Score = 30.3 bits (65), Expect = 0.21
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEI 193
C Y P+CG++G T+ N C +
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSL 793
Score = 28.3 bits (60), Expect = 0.86
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPC 187
C +SPVC S G T++N C
Sbjct: 818 CPSDFSPVCDSKGSTHQNIC 837
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 146 PVCGSDGKTYENPCE 190
P+C SD TYEN C+
Sbjct: 596 PICASDFSTYENLCQ 610
Score = 26.6 bits (56), Expect = 2.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCE 190
C K + PVC + +T++N C+
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQ 277
Score = 26.2 bits (55), Expect = 3.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 137 IYSPVCGSDGKTYENPC 187
++SPVC ++G T+ N C
Sbjct: 928 VFSPVCDTEGVTHANMC 944
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 119 LCICGKIYSPVCGSDGKTYENPC 187
L C K PVC S G+T+++ C
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLC 1092
Score = 25.8 bits (54), Expect = 4.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPC 187
C K+ +P+C + G+T+ N C
Sbjct: 66 CEKVGTPICDNFGETHINDC 85
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 35.5 bits (78), Expect = 0.006
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +2
Query: 116 PLCICGKI---YSPVCGSDGKTYENPCEI 193
P C+C + VCGSDGKTY N C +
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRL 489
Score = 30.7 bits (66), Expect = 0.16
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEI 193
C + PVC ++G+T++N CE+
Sbjct: 397 CEDVMRPVCATNGETFDNECEM 418
Score = 30.3 bits (65), Expect = 0.21
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 116 PLCICGKIYSPVCGSDGKTYENPCEI 193
P C Y P+CGSDG Y N C +
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQCHL 708
Score = 30.3 bits (65), Expect = 0.21
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 149 VCGSDGKTYENPCEI 193
VCGSDG TY N CE+
Sbjct: 880 VCGSDGTTYSNLCEL 894
Score = 29.9 bits (64), Expect = 0.28
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 149 VCGSDGKTYENPCEIFLRVKHDTQQYD 229
VCG+DGKTY N C FL++ +Q D
Sbjct: 330 VCGTDGKTYLNEC--FLKLAACKEQKD 354
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 149 VCGSDGKTYENPCEIFLRVKHDTQ 220
VCG+DG TY + C + H ++
Sbjct: 551 VCGTDGVTYSSECHMKKSACHQSK 574
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 35.5 bits (78), Expect = 0.006
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +2
Query: 116 PLCICGKI---YSPVCGSDGKTYENPCEI 193
P C+C + VCGSDGKTY N C +
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRL 497
Score = 30.7 bits (66), Expect = 0.16
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 128 CGKIYSPVCGSDGKTYENPCEI 193
C + PVC ++G+T++N CE+
Sbjct: 405 CEDVMRPVCATNGETFDNECEM 426
Score = 30.3 bits (65), Expect = 0.21
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 149 VCGSDGKTYENPCEI 193
VCGSDG TY N CE+
Sbjct: 819 VCGSDGTTYSNLCEL 833
Score = 29.9 bits (64), Expect = 0.28
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 149 VCGSDGKTYENPCEIFLRVKHDTQQYD 229
VCG+DGKTY N C FL++ +Q D
Sbjct: 338 VCGTDGKTYLNEC--FLKLAACKEQKD 362
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 149 VCGSDGKTYENPCEIFLRVKHDTQ 220
VCG+DG TY + C + H ++
Sbjct: 559 VCGTDGVTYSSECHMKKSACHQSK 582
>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical
protein F54G8.3 protein.
Length = 1139
Score = 30.3 bits (65), Expect = 0.21
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 173 YENPCEIFLRVKHDTQQ-YDHREKHRMR 253
Y NP EI L K+ TQ+ HR +HRM+
Sbjct: 916 YVNPAEIKLNTKYSTQETAPHRVEHRMK 943
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 28.3 bits (60), Expect = 0.86
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +2
Query: 122 CICGKIYSPVCGSDGK-TYENPC 187
C C ++PVC D K T+ +PC
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPC 471
>U41264-7|AAA82427.2| 819|Caenorhabditis elegans Hypothetical
protein F10E7.4 protein.
Length = 819
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 4/24 (16%)
Frame = -3
Query: 267 RGCPPRMRC----FSRWSYCCVSC 208
R CP ++ C +SRWS C VSC
Sbjct: 756 RPCPVKLTCQVGPWSRWSPCSVSC 779
>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
protein Y69A2AR.19 protein.
Length = 1256
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 146 PVCGSDGKTYENPCEIFL--RVKHDTQQYDHREKHRMRGGHPLL 271
P+ D + +P E+ + RV DH + HR GH L+
Sbjct: 60 PIASHDFSDFLDPHELQIAGRVARQDNNNDHLDTHRSSAGHELV 103
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +2
Query: 122 CICGKIYS-PVCGSDGKTYENPC 187
C C + PVC +DG Y +PC
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPC 550
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 25.8 bits (54), Expect = 4.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 173 YENPCEIFLRVKHDTQQYDHREKHRMRGGHP 265
Y++PC ++ D Y E+ R+R HP
Sbjct: 238 YDSPCHADKKLSRDELHYITTERVRLRPQHP 268
>AL110485-28|CAD36500.1| 145|Caenorhabditis elegans Hypothetical
protein Y46G5A.26b protein.
Length = 145
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 113 PPLCICGKIYSP-VCGSDGKTYENPCEIFLRVKHDT 217
P L + I SP V GS+G TYENP + + DT
Sbjct: 19 PMLRLVNGIGSPAVNGSEGFTYENPAVKKVSMSPDT 54
>AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical
protein Y46G5A.26a protein.
Length = 515
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 113 PPLCICGKIYSP-VCGSDGKTYENPCEIFLRVKHDT 217
P L + I SP V GS+G TYENP + + DT
Sbjct: 389 PMLRLVNGIGSPAVNGSEGFTYENPAVKKVSMSPDT 424
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical
protein C38D4.3 protein.
Length = 1784
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 206 KHDTQQYDHREKHRMRGG 259
KHD Q+++ R K +M GG
Sbjct: 854 KHDLQRFEQRMKMQMEGG 871
>U97005-10|AAK72084.1| 646|Caenorhabditis elegans Hypothetical
protein F19F10.12 protein.
Length = 646
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 134 KIYSPVCGSDGKTYENPCEIF 196
KIY + GS K ++ PC IF
Sbjct: 367 KIYDSLYGSFSKEFKTPCVIF 387
>U39648-2|AAM15606.1| 166|Caenorhabditis elegans Hypothetical
protein T13C5.7 protein.
Length = 166
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 95 SVTALPPPLCICGKIYSPVC 154
+VT P P +C K+Y P C
Sbjct: 44 TVTEPPFPCNVCQKVYDPAC 63
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 25.0 bits (52), Expect = 8.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 122 CICGKIYSPVCGSDGKTYENPCEIFLRVK 208
CIC SPV DG E P +F V+
Sbjct: 348 CICHVRRSPVKKIDGGVIEQPTTVFREVE 376
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 25.0 bits (52), Expect = 8.0
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +2
Query: 119 LCICGKIYSPVCGSDGKTYENPCEIFL 199
+C G+ VC S+G T+ + C ++
Sbjct: 173 MCSAGQTSLTVCDSEGNTHTDICSFYI 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,959,740
Number of Sequences: 27780
Number of extensions: 135594
Number of successful extensions: 357
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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