Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C03
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   1.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.6  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   3.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.8  

>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +3

Query: 273 PQYKLVGHRQVRATE 317
           PQ+K++GHRQ RA E
Sbjct: 33  PQFKVLGHRQ-RAME 46


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 103 IGYHF-GVSSDGTVYEGRGWSTLGAHAL 183
           + Y F GV+SDGT+     W+ +  H L
Sbjct: 56  VHYAFLGVNSDGTLKILDSWNEIDLHGL 83


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 273 PQYKLVGHRQVRATE 317
           PQ+K++GHR+ RA E
Sbjct: 215 PQFKVLGHRR-RAVE 228


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +1

Query: 442 VTEQNPSHYRSHNLI*FLLLVKNIWSRILPKLAYKNAYRLIPCNNI 579
           +TE  PS    H+    L L  NI     P  +   +  L+P NNI
Sbjct: 319 MTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSSNLMPLNNI 364


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 318 IPLLALAGVLPV 283
           IPL+A+AG+L V
Sbjct: 2   IPLIAIAGILAV 13


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -2

Query: 209 MPMLTEL--KCSACAPKVDHPLPSYTVPSLLTPKWYPISHH 93
           MP+L E   K      +   PL S + PS+ TP    ++ H
Sbjct: 1   MPLLQETTPKRDMLDSQEKTPLSSVSYPSMFTPSQLLMASH 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,349
Number of Sequences: 336
Number of extensions: 3497
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)