Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_C02
         (633 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3XSY6 Cluster: Glucose/galactose transporter family pr...    33   7.5  
UniRef50_A2QR49 Cluster: Function: co-expression of het-e and he...    33   7.5  
UniRef50_Q5LEH1 Cluster: Putative uncharacterized protein; n=1; ...    32   10.0 

>UniRef50_A3XSY6 Cluster: Glucose/galactose transporter family
           protein; n=1; Vibrio sp. MED222|Rep: Glucose/galactose
           transporter family protein - Vibrio sp. MED222
          Length = 399

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 10/36 (27%), Positives = 24/36 (66%)
 Frame = +2

Query: 248 VSIYIYARVQLTGKQFGDIAITKPSRVVSLYWIIIY 355
           VS   +  V L  +Q+GD+ +   +++++LYW++++
Sbjct: 237 VSFGTFTIVYLADQQYGDLGLVFATQIIALYWVLMF 272


>UniRef50_A2QR49 Cluster: Function: co-expression of het-e and het-c
           lead to cell death; n=1; Aspergillus niger|Rep:
           Function: co-expression of het-e and het-c lead to cell
           death - Aspergillus niger
          Length = 715

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 232 VCMRISGGTPEVVAVRLIEYIHTHLHN 152
           +C+ I G    V+A  +IEYI+TH HN
Sbjct: 355 LCLGIPGAGKTVMAATIIEYINTHRHN 381


>UniRef50_Q5LEH1 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides fragilis NCTC 9343|Rep: Putative
           uncharacterized protein - Bacteroides fragilis (strain
           ATCC 25285 / NCTC 9343)
          Length = 200

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = -3

Query: 310 NSDVSKLFTC*LYARV-NIYRYSSCMYVCM---RISGGTPEVVAVRLIEYIHTHLHNGL 146
           N D  + F C L+  V   YRY SC Y      +    T E+  VRL+ Y++ + H GL
Sbjct: 41  NCDTLEAF-CNLFRIVCTNYRYDSCTYAYRFYTKHEADTEELSGVRLLAYLYNNFHAGL 98


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,913,475
Number of Sequences: 1657284
Number of extensions: 9282720
Number of successful extensions: 24566
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24529
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)