Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B24
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    27   0.17 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   6.5  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   6.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.6  

>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -2

Query: 486 SNNLYFYGKDKAPYVVTEDGVKKILGLPENPTYVRLIKPPFIVEDGAVYAADDKVYII-- 313
           ++ LY     K   ++ +D V+    + E        KPPF+V+  + +   D++Y +  
Sbjct: 8   TDELYAIKILKKDIIIQDDDVE--CTMVEKRVLALSTKPPFLVQLHSCFQTMDRLYFVME 65

Query: 312 YVNG 301
           YVNG
Sbjct: 66  YVNG 69


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = -1

Query: 451 TLCCNXXXX*KDSRFTRES---NLRTSDK 374
           T+CC      + S  TRES   N  +SDK
Sbjct: 342 TICCKTRIIGRRSWVTRESQICNNSSSDK 370


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/21 (42%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 316 DID-FVISRVYRSIFNDKWWL 375
           +ID FV++R+  +I N+ W L
Sbjct: 4   EIDGFVLNRIQYAILNEAWRL 24


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 205 NLLVITVVLYERGFRSVRTRFLLKNKIGRL 294
           N+LV   +  +RG R +   FL    I  L
Sbjct: 43  NILVCVAIYTDRGLRRIGNLFLASLAIADL 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,891
Number of Sequences: 438
Number of extensions: 3136
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)