Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B21
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   5.0  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   5.0  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   5.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.7  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 89  SIKVWPAVVSHLNLCGL*FQV*RSLTEVLILKRYCHNTQNQNQN 220
           S+K+   + +  N   + F++  +    LI+   C N+ NQN N
Sbjct: 549 SMKLQKFINNDYNFNEVNFRILGANVNDLIMNTRCANSDNQNNN 592


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/60 (20%), Positives = 21/60 (35%)
 Frame = -3

Query: 448 SGLVSPYSYQEWTHIIKTTICIVFYMTKNDMIYYIYKKKGPDRVSCRLFSTGLFSEPVVV 269
           SG     S Q W +  +  I  +       ++   +   GPDR+       G+    V +
Sbjct: 240 SGSTYGVSGQRWQYAARAAISTMLASMGGGLVGLGFSLNGPDRIDILSQINGILGSLVAI 299


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 151 HLKSKAT*VKVRYNCGPHF 95
           HLK + + ++  Y CG  F
Sbjct: 641 HLKEEVSSIETNYECGLRF 659


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 361 DMIYYIYKKKGPDRVSCRLFSTGLFSEPVVVF 266
           D +Y++ +      +  ++   G F EPV VF
Sbjct: 58  DRLYFVMEYVNGGDLMYQIQQCGKFKEPVAVF 89


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 539 FYFHSNHNY 513
           FYF  NHNY
Sbjct: 231 FYFMLNHNY 239


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 539 FYFHSNHNY 513
           FYF  NHNY
Sbjct: 231 FYFMLNHNY 239


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 89  SIKVWPAVVSHLNLCGL 139
           ++ VW    S LNLC +
Sbjct: 143 AVDVWMCTASILNLCAI 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,486
Number of Sequences: 438
Number of extensions: 2257
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)