Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B19
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    24   1.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.0  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   2.7  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.7  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.7  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   2.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   8.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   8.1  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 282 PDDNWEPLIIIVNRKSGN 335
           PD  W+P I++ N   GN
Sbjct: 105 PDKVWKPDIVLFNNADGN 122


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 461 NQYTTFRGKPSDHILRHCTAYINDLYGI 378
           N Y  F+  P    L HCTA + D  G+
Sbjct: 300 NSYHEFQILPERGELGHCTASVMDENGL 327


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -3

Query: 227 NNNILVFLKVTLLRFNCIYIGAYLN 153
           + N+L+F++ T+ +FN +   A  N
Sbjct: 56  DENVLLFIECTMKKFNVVDENANFN 80


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 279 VPDDN-WEPLIIIVNRKSGN 335
           VP D+ W P I++ N   GN
Sbjct: 105 VPSDHIWRPDIVLYNNADGN 124


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 279 VPDDN-WEPLIIIVNRKSGN 335
           VP D+ W P I++ N   GN
Sbjct: 105 VPSDHIWRPDIVLYNNADGN 124


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +3

Query: 279 VPDDN-WEPLIIIVNRKSGN 335
           VP D+ W P I++ N   GN
Sbjct: 101 VPSDHIWRPDIVLYNNADGN 120


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 455 IGLWRRRHSCLGSKRAGFCTT 517
           +GL  R   CLG+    F TT
Sbjct: 153 VGLLERAFRCLGNNLTAFLTT 173


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 410 NAGECGPMASL 442
           +AGECGP A +
Sbjct: 169 SAGECGPAADV 179


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 343 LLLFPDFRFTIMINGSQLSSGTGFIL 266
           LL   DF+ T ++ G+  + GT FIL
Sbjct: 363 LLREADFKDTEILIGNNENEGTYFIL 388


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 343 LLLFPDFRFTIMINGSQLSSGTGFIL 266
           LL   DF+ T ++ G+  + GT FIL
Sbjct: 363 LLREADFKDTEILIGNNENEGTYFIL 388


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,283
Number of Sequences: 438
Number of extensions: 4515
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)