Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B17
(295 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 2.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 3.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 7.3
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 2.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 227 FNITSVGRLDFKLLTKRHVFDKQV 156
FN+T G+ KLL H K+V
Sbjct: 235 FNLTKYGKNQIKLLEIIHGLTKKV 258
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 3.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = +1
Query: 166 SKTCLFVNNLKSNLPTDVILKGCSIL 243
SK + VN K + P D+++ C+++
Sbjct: 514 SKNPVTVNLTKLHPPADLVVYACNVV 539
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 426 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 461
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 426 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 461
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 426 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 461
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 426 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 461
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 426 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 461
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 426 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 461
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 494 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 529
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 145 KFIFTCLSKTCLFVNNLKSNLPTDVILKGCSILTVQ 252
KF + + CL V L + L T VIL + VQ
Sbjct: 494 KFAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIVQ 529
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.8 bits (39), Expect = 7.3
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 108 SYF*KLLLRNSAK 146
SYF KLLL N K
Sbjct: 59 SYFQKLLLSNPCK 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,354
Number of Sequences: 438
Number of extensions: 879
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5994288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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