Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B16
         (360 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-3|AAA68744.1|  213|Caenorhabditis elegans Glutathione s-t...    26   6.9  
U97003-1|AAB52270.2|  527|Caenorhabditis elegans Udp-glucuronosy...    26   9.1  

>U29380-3|AAA68744.1|  213|Caenorhabditis elegans Glutathione
           s-transferase protein30 protein.
          Length = 213

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 156 INSLRSQFSEYLRLIKSYNV 97
           +N++  QF +YL  I+SYN+
Sbjct: 88  VNAIADQFKDYLNDIRSYNL 107


>U97003-1|AAB52270.2|  527|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein32 protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 9.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 274 LVNEYLPISFILCVTMCAF 330
           L N ++P+ F+LCVT   F
Sbjct: 500 LTNYFIPVVFLLCVTKLIF 518


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,373,305
Number of Sequences: 27780
Number of extensions: 123449
Number of successful extensions: 365
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)