Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B14
         (188 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   0.65 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   0.65 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   0.65 
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      20   2.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    19   3.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    19   3.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   6.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    19   6.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    18   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    18   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    18   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    18   8.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    18   8.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    18   8.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    18   8.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    18   8.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    18   8.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           18   8.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    18   8.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    18   8.0  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 0.65
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 85  QQIEQDKTEYNYQDWYAYYNPKSRSYSP 2
           QQ+    + Y+Y+D Y Y   +    SP
Sbjct: 33  QQMPPHYSNYHYEDPYGYTGSEETPPSP 60


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 0.65
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 85  QQIEQDKTEYNYQDWYAYYNPKSRSYSP 2
           QQ+    + Y+Y+D Y Y   +    SP
Sbjct: 33  QQMPPHYSNYHYEDPYGYTGSEETPPSP 60


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 0.65
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 85  QQIEQDKTEYNYQDWYAYYNPKSRSYSP 2
           QQ+    + Y+Y+D Y Y   +    SP
Sbjct: 33  QQMPPHYSNYHYEDPYGYTGSEETPPSP 60


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 188 VRRHWLKFI*SARSVATFLKATRD 117
           VR  W+ F  +A++V TF++   D
Sbjct: 31  VRGVWVSFNQTAQNVDTFVREQID 54


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 168 IYLIGSVCCYFSESNKGSRTPCLRQKSS 85
           I+   S+C    +S++ S  P   QKS+
Sbjct: 220 IFTYTSICIEIWQSSESSLRPRSSQKSA 247


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 103 SPSEK*QQIEQDKTEYNYQDWYAYYN 26
           +PS+   QI Q  T      + +YYN
Sbjct: 341 TPSQSPNQIYQPVTNLTNLTYPSYYN 366


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 1   EENTT*TWD 27
           E+NTT  WD
Sbjct: 808 EDNTTLVWD 816


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 91  K*QQIEQDKTEYNYQDWYAYYNPKSR 14
           K ++++ DKTE         YNP  R
Sbjct: 302 KMKEMKMDKTELGCLRAIILYNPDVR 327


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 126 CFQKSSNRPS 155
           CF KSS +P+
Sbjct: 154 CFFKSSKKPA 163


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 126 CFQKSSNRPS 155
           CF KSS +P+
Sbjct: 154 CFFKSSKKPA 163


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 126 CFQKSSNRPS 155
           CF KSS +P+
Sbjct: 154 CFFKSSKKPA 163


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 126 CFQKSSNRPS 155
           CF KSS +P+
Sbjct: 154 CFFKSSKKPA 163


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
          protein.
          Length = 230

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
          protein.
          Length = 297

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
          protein.
          Length = 157

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
          Scr protein.
          Length = 312

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 34 YYNPKSRSYSP 2
          YYNP + S  P
Sbjct: 29 YYNPNANSTYP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,847
Number of Sequences: 336
Number of extensions: 503
Number of successful extensions: 26
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 42
effective length of database: 108,473
effective search space used:  2169460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)