Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B12
(426 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 178 3e-46
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 176 1e-45
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 150 1e-37
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 144 7e-36
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 140 8e-35
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 126 1e-30
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 74 8e-15
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 73 2e-14
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 67 9e-13
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 66 2e-12
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 65 5e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 59 2e-10
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 57 1e-09
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 53 2e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 50 1e-07
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 50 2e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 49 3e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 45 4e-06
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 32 0.032
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 1.6
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 1.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 2.8
SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces po... 26 2.8
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 25 3.7
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 25 3.7
SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase ... 25 3.7
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 25 3.7
SPAC1F12.04c |||conserved fungal protein|Schizosaccharomyces pom... 25 4.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 24 8.6
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 24 8.6
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 24 8.6
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 178 bits (434), Expect = 3e-46
Identities = 79/92 (85%), Positives = 88/92 (95%)
Frame = +2
Query: 149 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 328
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ VELALWDTAGQ
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQ 64
Query: 329 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
EDYDRLRPLSYPD+ VIL+CF+VDSPDSL+N+
Sbjct: 65 EDYDRLRPLSYPDSHVILICFAVDSPDSLDNV 96
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 176 bits (428), Expect = 1e-45
Identities = 76/92 (82%), Positives = 88/92 (95%)
Frame = +2
Query: 149 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 328
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ +ELALWDTAGQ
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQ 64
Query: 329 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
EDYDRLRPLSYPD+ V+L+CFSVD+P+SL+N+
Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPESLDNV 96
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 150 bits (363), Expect = 1e-37
Identities = 69/105 (65%), Positives = 82/105 (78%), Gaps = 2/105 (1%)
Frame = +2
Query: 116 SSSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DG 289
S+ SG + KKLV+VGDG CGKTCLLIVFS FPE YVPTVFENY+ DI +
Sbjct: 2 SAFKKSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNS 61
Query: 290 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
K +ELALWDTAGQE+YDRLRPLSYP+++VIL+CFS+D P SL N+
Sbjct: 62 KVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNV 106
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 144 bits (348), Expect = 7e-36
Identities = 64/92 (69%), Positives = 77/92 (83%)
Frame = +2
Query: 149 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 328
IR+KLV+VGDGACGKT LL VF+ FP YVPTVFENYV+D VDGK V+LALWDTAGQ
Sbjct: 7 IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQ 66
Query: 329 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
E+Y+RLRP+SY +IL+ F++DSPDSLEN+
Sbjct: 67 EEYERLRPMSYAKAHIILVGFAIDSPDSLENV 98
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 140 bits (339), Expect = 8e-35
Identities = 64/102 (62%), Positives = 79/102 (77%)
Frame = +2
Query: 119 SSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 298
SS I +K+VI+GDGA GKT LL VF+K FP+VY PT+FENY+ DI VDG +
Sbjct: 2 SSCFGSKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSI 61
Query: 299 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
EL+LWDTAGQE+YD+LR LSY DT VI++CF+VDS DSLEN+
Sbjct: 62 ELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENV 103
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 126 bits (304), Expect = 1e-30
Identities = 56/89 (62%), Positives = 68/89 (76%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 337
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + + L L+DTAGQEDY
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDY 64
Query: 338 DRLRPLSYPDTDVILMCFSVDSPDSLENI 424
DRLRPLSYP TDV L+CFSV SP S EN+
Sbjct: 65 DRLRPLSYPQTDVFLVCFSVTSPASFENV 93
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 74.1 bits (174), Expect = 8e-15
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 334
KL+++GD GK+CLL+ FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
+ + Y IL+ + V S +N+
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNV 100
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 72.5 bits (170), Expect = 2e-14
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 334
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + E++GK V+L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
+ + Y I++ + V DS N+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNV 99
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 67.3 bits (157), Expect = 9e-13
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 334
K+VI+GD GKTCL+ F +F Y T+ +++ D+ VD K V L LWDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
+ L Y D ++ ++V++ S +++
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSV 99
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 66.5 bits (155), Expect = 2e-12
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Frame = +2
Query: 116 SSSASSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVD-G 289
+S+ + + I +KLV++GD A GK+ L++ F KDQF + T+ ++ + +D
Sbjct: 2 ASNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDEN 61
Query: 290 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLE 418
V+L +WDTAGQE Y L P+ Y + + ++ + + SLE
Sbjct: 62 TSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLE 104
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 64.9 bits (151), Expect = 5e-12
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 337
KLV+VGDG GK+ L I + F + Y PT+ ++Y E+DG+ L + DTAGQE+Y
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEY 69
Query: 338 DRLRPLSYPDTDVILMCFSVDSPDSLENI 424
+R + L+ +++ S S + I
Sbjct: 70 SAMREQYMRTGEGFLLVYNITSRSSFDEI 98
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 59.3 bits (137), Expect = 2e-10
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = +2
Query: 146 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDT 319
++RK KLV +G+ + GKT L+ F DQF Y T+ ++++ + ++ + V L LWDT
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67
Query: 320 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLEN 421
AGQE + L P D+ V ++ + + + +S N
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN 101
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 56.8 bits (131), Expect = 1e-09
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 334
K++I+G+ GKT ++ + +F + Y T+ +++ ++ VD K V L LWDTAGQE
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
+ L Y D ++ + V++ S E +
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETL 99
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 52.8 bits (121), Expect = 2e-08
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 334
K V++GD GK+ LL+ F++++F T+ + +I +D K+++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
Y + Y L+ + + S +N+
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV 101
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 50.4 bits (115), Expect = 1e-07
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 334
K+ ++GD + GKT L++ + + F E T+ N++ I + ++ ++WD GQ +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
+ + P+ D IL F + +L +I
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSI 101
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 50.0 bits (114), Expect = 2e-07
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 140 MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 316
MA I+ +++ ++G + GK+ L + + ++ F E Y PT+ + +I+ G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 317 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
TAGQ++Y L ++ +S+ S S E +
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMV 96
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 48.8 bits (111), Expect = 3e-07
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG-----KQVELALWDTA 322
K+V+ G GK+CLL F K+Q+ + TV ++ + I G K+++L +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 323 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
GQE + + Y ++ + V + DS E +
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL 104
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 45.2 bits (102), Expect = 4e-06
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 158 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 334
KLV+VGDG GKT + +F + Y+ T+ E + + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 335 YDRLRPLSYPDTDVILMCFSVDSPDSLENI 424
LR Y ++ F V S + +N+
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNV 100
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 32.3 bits (70), Expect = 0.032
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +2
Query: 167 IVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRL 346
+VG +CGKT LL F + + TV V +E Q L L G+ D D L
Sbjct: 426 VVGSKSCGKTALLSSFINNNTNRLTPNTV----VNSVEFQSTQRYLVL-SEIGETDLDIL 480
Query: 347 -RPLSYPDTDVILMCFSVDSPDSLENI 424
P S D++ + + +P+S I
Sbjct: 481 AEPKSLEACDILCLLYDSSNPNSFSFI 507
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 245 PTVFENYVADIEVDGKQVELALWDTAGQ-EDYDRLRPLSYPDTDVILMCFSV 397
P +FE+ I+ G V+L LW AG+ E DR+ P + LM F +
Sbjct: 1162 PFIFEDVERAIDPSGTNVDL-LWRAAGKFELLDRILPKLFLTGHKTLMFFQM 1212
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 26.6 bits (56), Expect = 1.6
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 241 RADSV*ELRSRHRGGWETGGTSAVGYGRPRGLRQAAAAVIPGH*CDLDVLLGGLAR 408
R+ + + S +R + G TS GY P R + A+ P D+D GL++
Sbjct: 131 RSQELPRITSSNREIYLNGQTSDGGYAAPAISRAESTAIQPSEPHDVDTSKNGLSK 186
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 2.8
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +2
Query: 140 MAAIRKK--LVIVGDGACGKTCLL 205
+ I KK ++VGD A GKTC+L
Sbjct: 1863 ITCINKKWPCILVGDTATGKTCIL 1886
Score = 24.2 bits (50), Expect = 8.6
Identities = 8/31 (25%), Positives = 20/31 (64%)
Frame = +2
Query: 152 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYV 244
++ +++VGD CGKT + + ++ E+++
Sbjct: 1186 KEPVLLVGDTGCGKTTVCQILAECLHKELHI 1216
>SPBC14F5.11c |mug186||sorting nexin Snx41|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 586
Score = 25.8 bits (54), Expect = 2.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 347 AACRSPLGRPYPTALVPPV 291
A+ R L R YPT LVPP+
Sbjct: 108 ASLRVQLSRLYPTCLVPPL 126
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 3.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 228 N*SLLNTIRRHVLPHAPSPTITNFLRIAAIGPELAEEEQ 112
N L N + +H + P T+ FLR PE +EQ
Sbjct: 355 NDDLQNLLSKHRISRIPMSTVNAFLRAEDSIPESFSDEQ 393
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 25.4 bits (53), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 290 SHPPRCRLRSSQTLSARTLPG 228
S PPR +L SS++ + R LPG
Sbjct: 436 SAPPRSKLISSKSEAGRALPG 456
>SPBC56F2.10c |alg5||dolichyl-phosphate beta-glucosyltransferase
Alg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 3.7
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 140 MAAIRKKLVIVGDGACGKT-CLLIVFSKDQFPEVYVPTVFENYVADIEV 283
M K L I+G G T C +FS++ + ++ E ++ DIEV
Sbjct: 214 MHCFHKLLQILGIREIGDTQCGFKLFSREAYQSIFPRMHVEGWIFDIEV 262
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 25.4 bits (53), Expect = 3.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 207 IRRHVLPHAPSPTITNFLRIAAIG 136
I H+LP+ TITNF R+ G
Sbjct: 188 IENHLLPNELPLTITNFFRLGTPG 211
>SPAC1F12.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 191
Score = 25.0 bits (52), Expect = 4.9
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 53 RFWLISAKYWLIDT 12
+ WL S+++WL+DT
Sbjct: 106 KLWLWSSRFWLLDT 119
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 24.2 bits (50), Expect = 8.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 356 TAAAACRSPLGRPYPTA-LVPPVSHPPRCRLRSSQTLSARTLP 231
+A+AA S P P + L PP S PPR + SA +P
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 24.2 bits (50), Expect = 8.6
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -3
Query: 298 HLFPIHLDVGYVVLKHCRHVHFRELIFTEHD 206
H+FP++ D V+ C LI HD
Sbjct: 524 HIFPLYSDTWCAVMDFCPRGDLLSLIEDRHD 554
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 24.2 bits (50), Expect = 8.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 57 LKILANFCEILAYRH 13
+KILANFCE + H
Sbjct: 572 IKILANFCEPTIHEH 586
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,716,019
Number of Sequences: 5004
Number of extensions: 33640
Number of successful extensions: 113
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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