Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B06
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    27   0.12 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    27   0.12 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    27   0.12 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   0.46 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.6  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.6  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 291 VKPSRYRFPAPFVALVEFLSKWCVWVWL 208
           + P  +  P P + L +FLS    W+WL
Sbjct: 195 IPPYLFFVPPPLMFLQDFLSHQHAWIWL 222


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 291 VKPSRYRFPAPFVALVEFLSKWCVWVWL 208
           + P  +  P P + L +FLS    W+WL
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQHAWIWL 455


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 291 VKPSRYRFPAPFVALVEFLSKWCVWVWL 208
           + P  +  P P + L +FLS    W+WL
Sbjct: 428 IPPYLFFVPPPLMFLQDFLSHQHAWIWL 455


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +1

Query: 37  VKGRQGKRRPAVSGATETGAPVGKKGRTADLGALKLPSHGYPTEHPFNKDGYRYILAEPD 216
           + G  GK R   + A+ +     K  RT  LGA   P   +P  +PF   G   +LA   
Sbjct: 168 IGGTTGKLRRRSTAASRSRLAAFK--RTIALGAFYQPLQPFPPPYPF-YPGTSAMLAAYQ 224

Query: 217 PHAPFRQ 237
            + P+ Q
Sbjct: 225 RYNPYLQ 231


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 261 PFVALVEFLSKWCVWVWL 208
           P V L +F+S    W+WL
Sbjct: 451 PVVFLNDFISHQHAWIWL 468


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 261 PFVALVEFLSKWCVWVWL 208
           P V L +F+S    W+WL
Sbjct: 451 PVVFLNDFISHQHAWIWL 468


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 261 PFVALVEFLSKWCVWVWL 208
           P V L +F+S    W+WL
Sbjct: 451 PVVFLNDFISHQHAWIWL 468


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 261 PFVALVEFLSKWCVWVWL 208
           P V L +F+S    W+WL
Sbjct: 451 PVVFLNDFISHQHAWIWL 468


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 427 GCWYWESSIEE 459
           G WYW+ + +E
Sbjct: 28  GIWYWQCNTDE 38


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 484 VGWGRRYANLQAPLGYDKFG 543
           +GW + Y N  A +  DK G
Sbjct: 493 IGWQKVYENKPAKIAGDKKG 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,537
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)