Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B06
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 140 5e-34
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 140 5e-34
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 40 0.001
U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical p... 33 0.15
AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.19
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 31 0.45
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 31 0.45
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 29 3.2
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 29 3.2
AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical ... 29 3.2
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 29 3.2
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 29 3.2
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 28 4.2
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 4.2
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 4.2
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 28 4.2
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 28 5.5
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 28 5.5
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 28 5.5
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 27 7.3
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 27 7.3
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 27 7.3
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 27 7.3
AF016416-7|AAB65272.2| 307|Caenorhabditis elegans Hypothetical ... 27 7.3
Z82267-2|CAB05190.1| 410|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 27 9.6
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 27 9.6
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 140 bits (340), Expect = 5e-34
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Frame = +1
Query: 49 QGKRRPAVSGATETGAPV-GKKGR-TADLGALKLPSHGYPTEHPFNKDGYRYILAEPDPH 222
+G + S APV GKK + AD + P+ G + PF+KD YRY L E DP+
Sbjct: 215 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 273
Query: 223 APFRQEFDESNEWSGKPIPGWLYRSLCPGIVLLALHDRAPQLKISEDRVAVTGEKGYCMV 402
P +++ N+ S IP + YR L V ++ +DRA QL I+ + ++TG +GY M
Sbjct: 274 VPEDPAWNQ-NQSSAYVIPSFHYRELLNPTVNVSSNDRAFQLSINGN--SITGFEGYSMA 330
Query: 403 RATHGVSRGCWYWESSIEELPEGAASRVGWGRRYANLQAPLGYDKFGYSWRSRKGTRFH 579
RA+HGVS+G WY+E + ++ P+ + R+GW + YA+LQA +GY+KF Y WRS+ GT+FH
Sbjct: 331 RASHGVSKGTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFH 389
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 140 bits (340), Expect = 5e-34
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Frame = +1
Query: 49 QGKRRPAVSGATETGAPV-GKKGR-TADLGALKLPSHGYPTEHPFNKDGYRYILAEPDPH 222
+G + S APV GKK + AD + P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 223 APFRQEFDESNEWSGKPIPGWLYRSLCPGIVLLALHDRAPQLKISEDRVAVTGEKGYCMV 402
P +++ N+ S IP + YR L V ++ +DRA QL I+ + ++TG +GY M
Sbjct: 272 VPEDPAWNQ-NQSSAYVIPSFHYRELLNPTVNVSSNDRAFQLSINGN--SITGFEGYSMA 328
Query: 403 RATHGVSRGCWYWESSIEELPEGAASRVGWGRRYANLQAPLGYDKFGYSWRSRKGTRFH 579
RA+HGVS+G WY+E + ++ P+ + R+GW + YA+LQA +GY+KF Y WRS+ GT+FH
Sbjct: 329 RASHGVSKGTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFH 387
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 49 QGKRRPAVSGATETGAPV-GKKGR-TADLGALKLPSHGYPTEHPFNKDGYRYILAEPDPH 222
+G + S APV GKK + AD + P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 223 AP 228
P
Sbjct: 272 VP 273
>U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical
protein F20A1.9 protein.
Length = 433
Score = 33.1 bits (72), Expect = 0.15
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +1
Query: 331 DRAPQLKISEDRVAVTGE--KGYCMVRATHGV-SRGCWYWESSIEELPEGAASRVGWGRR 501
D+ L+I E +A E K + R T G+ G +Y+E +I +G RVGW
Sbjct: 15 DQDLHLEIDETGLACKSEVKKRWLGARGTAGLYGNGKYYYEVTITS--KGLC-RVGWATL 71
Query: 502 YANLQAPLGYDKFGYSWRSRKGT 570
+L G D FGY K T
Sbjct: 72 GGSLNIGKGLDSFGYGGTGMKST 94
>AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical
protein F19B10.11 protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 133 ALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPI 276
A + P+ + E +++GY ++ PDP A FR E DE EW+ +P+
Sbjct: 14 ASEFPTVSWSREEEASQNGYSFMDHYPDPEATFRCE-DE--EWNPRPV 58
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 31.5 bits (68), Expect = 0.45
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 354 YLQLWSAVVQRQQH--YARAQRPVKPSRYRF-PAPFVALV 244
Y Q WSA+ Q + RP KP +Y+F PAP V L+
Sbjct: 96 YFQDWSAIASTSQPPAFPPPPRPPKPEQYKFPPAPSVPLL 135
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 31.5 bits (68), Expect = 0.45
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 354 YLQLWSAVVQRQQH--YARAQRPVKPSRYRF-PAPFVALV 244
Y Q WSA+ Q + RP KP +Y+F PAP V L+
Sbjct: 96 YFQDWSAIASTSQPPAFPPPPRPPKPEQYKFPPAPSVPLL 135
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 131 EL*NYPHMVTPPSTPSIKTAIGIYWPSQTHTHHLDRNSTRATNGAGN 271
E+ +P ++T P+TPS I I P QT+ + + T A N N
Sbjct: 233 EIQEHPMVLTSPATPSTADNIYIALPEQTNVYLRPQRPTFAANLTNN 279
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 208 EPDPHAPFRQEFDESNEWSGKPIPGWLYR 294
E D AP+ + + W GKPIP WLY+
Sbjct: 370 EIDESAPYNPK-NLPLGWDGKPIPYWLYK 397
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 482 RDAAPSGSSSIDDSQYQHPRDTP*VARTMQ*PFSPVTATRSSD 354
++++PSGSSS DDS + D + T F P +++ SS+
Sbjct: 38 KESSPSGSSSEDDSASSNDDDQRSPSATSSFIFPPASSSSSSE 80
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 482 RDAAPSGSSSIDDSQYQHPRDTP*VARTMQ*PFSPVTATRSSD 354
++++PSGSSS DDS + D + T F P +++ SS+
Sbjct: 38 KESSPSGSSSEDDSASSNDDDQRSPSATSSFIFPPASSSSSSE 80
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 28.7 bits (61), Expect = 3.2
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 579 VESGAFPTSPRVPEFV---ISEGRLQVRVAAPPPHAGRRPLGQLLDRRLPVPASTRHAVS 409
V S + TSPRV + +S R ++ P RP+ + + P PAS R AV
Sbjct: 1346 VASSSNNTSPRVNVTLGGALSSSRSHNSLSQEPAIV-IRPVDLNMPKATP-PASIRGAVP 1403
Query: 408 GA-DHAVALLPGDGDAVLRYLQLWSAVVQRQQ 316
A A+ L P G AVLR ++ S + +R Q
Sbjct: 1404 TAITQALQLQPNGGGAVLRQVRPASGLRERLQ 1435
>AF003135-5|AAK18990.1| 678|Caenorhabditis elegans Hypothetical
protein W03F11.6b protein.
Length = 678
Score = 28.7 bits (61), Expect = 3.2
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 579 VESGAFPTSPRVPEFV---ISEGRLQVRVAAPPPHAGRRPLGQLLDRRLPVPASTRHAVS 409
V S + TSPRV + +S R ++ P RP+ + + P PAS R AV
Sbjct: 364 VASSSNNTSPRVNVTLGGALSSSRSHNSLSQEPAIV-IRPVDLNMPKATP-PASIRGAVP 421
Query: 408 GA-DHAVALLPGDGDAVLRYLQLWSAVVQRQQ 316
A A+ L P G AVLR ++ S + +R Q
Sbjct: 422 TAITQALQLQPNGGGAVLRQVRPASGLRERLQ 453
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 28.7 bits (61), Expect = 3.2
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 579 VESGAFPTSPRVPEFV---ISEGRLQVRVAAPPPHAGRRPLGQLLDRRLPVPASTRHAVS 409
V S + TSPRV + +S R ++ P RP+ + + P PAS R AV
Sbjct: 1344 VASSSNNTSPRVNVTLGGALSSSRSHNSLSQEPAIV-IRPVDLNMPKATP-PASIRGAVP 1401
Query: 408 GA-DHAVALLPGDGDAVLRYLQLWSAVVQRQQ 316
A A+ L P G AVLR ++ S + +R Q
Sbjct: 1402 TAITQALQLQPNGGGAVLRQVRPASGLRERLQ 1433
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 403 RATHGV-SRGCWYWESSIEELPEGAASRVGWGRRYANLQAPLGYDKFGYSWRSRK 564
RAT G+ G +Y+E ++ +G RVGW +L+ ++ FGY +K
Sbjct: 119 RATAGLYGNGKYYYEVTVTR--DGLC-RVGWATLSGSLKIGTDFESFGYGGTGKK 170
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 410 VARTMQ*PFSPVTATRSSDIFSC 342
VAR +Q PFS V T+S +I +C
Sbjct: 51 VARCLQFPFSTVVTTQSGEIVAC 73
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 406 ATHGVSRGCWYWESSIEELPEGAASRVGWGRRYANLQAPLGYDKFGYSWRSRKGTRFH 579
AT+ V G WY+E E+ ++GW + + LG D Y++ G ++H
Sbjct: 963 ATYAVCGGKWYFEF---EILTAGYMKIGWMDIGSTPEIQLGADDRSYAFDGYLGRKWH 1017
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 406 ATHGVSRGCWYWESSIEELPEGAASRVGWGRRYANLQAPLGYDKFGYSWRSRKGTRFH 579
AT+ V G WY+E E+ ++GW + + LG D Y++ G ++H
Sbjct: 1084 ATYAVCGGKWYFEF---EILTAGYMKIGWMDIGSTPEIQLGADDRSYAFDGYLGRKWH 1138
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -1
Query: 537 FVIS---EGRLQVRVAAPPPHAGRRPLGQLLDRRLPVPASTRHAVSGADHA 394
FVIS E +V PPPH G L+++ LP+P +++H S +A
Sbjct: 368 FVISLVLERMATSQVDIPPPH-GVSTFAGLVNKFLPIPKNSKHEDSTLQYA 417
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +3
Query: 24 TRW*R-EGSAGEAAPGRQRGD*NGC--PCRQEGTDCRSGSSETTL 149
T W G + + PG QR GC P QE T C+ S ETTL
Sbjct: 655 TEWCEWSGCSSKCGPG-QRTRTRGCLGPNGQEATTCQGPSIETTL 698
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 116 RPFLPTGAPVSVAPLTAGRRFP 51
+P LPT APVS+ P + FP
Sbjct: 881 KPDLPTAAPVSIIPSMSNTSFP 902
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 46 RQGKRRPAVSG-ATETGAPVGKKGRTADLGALKLPSHGYP 162
+QG +PAVS A + G P G +G +G +L G P
Sbjct: 767 QQGTPKPAVSQQAVQQGMPAGIQGMPTGMGMQQLQGLGMP 806
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 46 RQGKRRPAVSG-ATETGAPVGKKGRTADLGALKLPSHGYP 162
+QG +PAVS A + G P G +G +G +L G P
Sbjct: 2146 QQGTPKPAVSQQAVQQGMPAGIQGMPTGMGMQQLQGLGMP 2185
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 116 RPFLPTGAPVSVAPLTAGRRFP 51
+P LPT APVS+ P + FP
Sbjct: 881 KPDLPTAAPVSIIPSMSNTSFP 902
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 34 NVKGRQGKRRPAVSGATETGAPVGKKGRTADL 129
N+ G RRPA SGA + A +G G +L
Sbjct: 47 NIFSTDGSRRPAPSGAHDGNANIGGTGSVDNL 78
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 42 GSAGEAA-PGRQRGD*NGCPCRQEGTDCRSGSSETTLTWLPHR 167
G+ G+A PG D N CPC Q D SS T+ P R
Sbjct: 256 GTPGQAGKPGAPGKDANYCPCPQRQDDRTPPSSGTSAPQPPPR 298
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 46 RQGKRRPAVSGATETGAPVGKKGR 117
++G+ RPA + + + G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 46 RQGKRRPAVSGATETGAPVGKKGR 117
++G+ RPA + + + G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
>AF016416-7|AAB65272.2| 307|Caenorhabditis elegans Hypothetical
protein F29A7.2 protein.
Length = 307
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 259 WSGKPIPGWLYRSLCPGIVLLALHDRAPQLKISEDRVAVTGEKGYCMV 402
W G P G SL + A R QLK++ + VT EK C++
Sbjct: 6 WKGVPA-GCPLTSLSFSLCSRAAKSRVTQLKLNVQTIQVTVEKSLCLL 52
>Z82267-2|CAB05190.1| 410|Caenorhabditis elegans Hypothetical
protein F38C2.4 protein.
Length = 410
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Frame = +1
Query: 151 HGYPTEHP-----FNKDGYRYILAEPDPHAPFRQEFDESNEW 261
HG+PT H +K G+R EP+P F E+ NE+
Sbjct: 352 HGFPTIHLALLKIMSKYGFRIFNVEPNPQCYFCCEYSLINEF 393
>Z81074-7|CAB03042.1| 495|Caenorhabditis elegans Hypothetical
protein F32B6.8b protein.
Length = 495
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 567 AFPTSPRVPEFVISEGRLQVRVAAPPPHAGRR 472
A P P++PE + + R V +A+ PPH G R
Sbjct: 124 ANPIYPKLPE-ISDQPRSAVPMASAPPHGGDR 154
>Z81074-6|CAE46669.1| 475|Caenorhabditis elegans Hypothetical
protein F32B6.8a protein.
Length = 475
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 567 AFPTSPRVPEFVISEGRLQVRVAAPPPHAGRR 472
A P P++PE + + R V +A+ PPH G R
Sbjct: 104 ANPIYPKLPE-ISDQPRSAVPMASAPPHGGDR 134
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = -2
Query: 170 CSVG*PCEGSFRAPRSAVRPFL---PTGAPVSVAPLTAGRRFPC 48
CS PC F P+ P GAP++ P+ PC
Sbjct: 189 CSATKPCPNGFSCNDKKCCPYASACPAGAPLNNGPMKCSENAPC 232
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 149 EGSFRAPRSAVRPFLPTGAPVSVAPLTAGRRFPCRPFTLPASGT 18
+GSF + A+RP +P P P + P RP T S T
Sbjct: 31 DGSFSSQELALRPVMPESTPSVAVP---AKPPPLRPSTQSVSST 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,044,334
Number of Sequences: 27780
Number of extensions: 319602
Number of successful extensions: 1147
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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