Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B05
(401 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12 p... 182 4e-46
BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12 p... 182 4e-46
BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12 p... 182 4e-46
AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12 p... 182 4e-46
AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12 p... 182 4e-46
X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12 pro... 175 5e-44
M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and DNA-dam... 45 1e-04
L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein. 45 1e-04
BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and DNA-d... 45 1e-04
AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and DNA-d... 45 1e-04
AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and DNA-d... 45 1e-04
CR457038-1|CAG33319.1| 159|Homo sapiens GADD45G protein. 36 0.051
BT007234-1|AAP35898.1| 159|Homo sapiens growth arrest and DNA-d... 36 0.051
BC019325-1|AAH19325.1| 159|Homo sapiens growth arrest and DNA-d... 36 0.051
BC000465-1|AAH00465.1| 159|Homo sapiens growth arrest and DNA-d... 36 0.051
AL161910-2|CAH71791.1| 159|Homo sapiens growth arrest and DNA-d... 36 0.051
AL161910-1|CAH71790.1| 141|Homo sapiens growth arrest and DNA-d... 36 0.051
AF494037-1|AAM00007.1| 159|Homo sapiens growth arrest and DNA-d... 36 0.051
AF265659-1|AAF73468.1| 159|Homo sapiens GADD45 gamma protein. 36 0.051
AF079806-1|AAD28544.1| 159|Homo sapiens cytokine responsive pro... 36 0.051
AF078078-1|AAC83329.1| 159|Homo sapiens growth arrest and DNA-d... 36 0.051
D83023-1|BAA84543.1| 159|Homo sapiens gadd45-related protein pr... 35 0.088
AF087883-1|AAK00414.1| 159|Homo sapiens growth arrest and DNA d... 35 0.088
BC038953-1|AAH38953.1| 444|Homo sapiens COG3 protein protein. 29 4.4
AL606514-2|CAH73267.1| 828|Homo sapiens component of oligomeric... 29 4.4
AL139326-1|CAH72888.1| 828|Homo sapiens component of oligomeric... 29 4.4
AF349676-1|AAK66974.1| 828|Homo sapiens vesicle docking protein... 29 4.4
AF332595-1|AAK06848.1| 828|Homo sapiens tethering factor SEC34 ... 29 4.4
AK074886-1|BAC11267.1| 207|Homo sapiens protein ( Homo sapiens ... 29 5.8
AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein. 29 5.8
AB051895-1|BAB40803.1| 5065|Homo sapiens epiplakin 1 protein. 29 5.8
>BC095424-1|AAH95424.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 182 bits (443), Expect = 4e-46
Identities = 84/115 (73%), Positives = 97/115 (84%)
Frame = +1
Query: 55 VLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYNKLV 234
+ +GG MDVNTALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVKVDNN*KLGEWAGLCKID*DGEARKIVGCSCVVLKDFGEETPA 399
+ALC EHQI L+KVD+N KLGEW GLCKID +G+ RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
>BC071930-1|AAH71930.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 182 bits (443), Expect = 4e-46
Identities = 84/115 (73%), Positives = 97/115 (84%)
Frame = +1
Query: 55 VLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYNKLV 234
+ +GG MDVNTALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVKVDNN*KLGEWAGLCKID*DGEARKIVGCSCVVLKDFGEETPA 399
+ALC EHQI L+KVD+N KLGEW GLCKID +G+ RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
>BC017321-1|AAH17321.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 182 bits (443), Expect = 4e-46
Identities = 84/115 (73%), Positives = 97/115 (84%)
Frame = +1
Query: 55 VLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYNKLV 234
+ +GG MDVNTALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVKVDNN*KLGEWAGLCKID*DGEARKIVGCSCVVLKDFGEETPA 399
+ALC EHQI L+KVD+N KLGEW GLCKID +G+ RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
>AL137783-3|CAC12946.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 182 bits (443), Expect = 4e-46
Identities = 84/115 (73%), Positives = 97/115 (84%)
Frame = +1
Query: 55 VLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYNKLV 234
+ +GG MDVNTALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVKVDNN*KLGEWAGLCKID*DGEARKIVGCSCVVLKDFGEETPA 399
+ALC EHQI L+KVD+N KLGEW GLCKID +G+ RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
>AB061840-1|BAB79478.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 182 bits (443), Expect = 4e-46
Identities = 84/115 (73%), Positives = 97/115 (84%)
Frame = +1
Query: 55 VLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYNKLV 234
+ +GG MDVNTALQEVLKTALIH GL G+ EAAKALDKRQA LCVLA NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVKVDNN*KLGEWAGLCKID*DGEARKIVGCSCVVLKDFGEETPA 399
+ALC EHQI L+KVD+N KLGEW GLCKID +G+ RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQA 120
>X53505-1|CAA37582.1| 132|Homo sapiens ribosomal protein S12
protein.
Length = 132
Score = 175 bits (426), Expect = 5e-44
Identities = 82/115 (71%), Positives = 94/115 (81%)
Frame = +1
Query: 55 VLSGGAMDVNTALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYNKLV 234
+ +GG MDVNTALQEVLKTALIH GL G+ EAAKALDKRQA LCV A NCDE Y KLV
Sbjct: 6 IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65
Query: 235 QALCNEHQIPLVKVDNN*KLGEWAGLCKID*DGEARKIVGCSCVVLKDFGEETPA 399
+AL EHQI L+KVD+N KLGEW GLCKID +G RK+VGCSCVV+KD+G+E+ A
Sbjct: 66 EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQA 120
>M60974-1|AAA35863.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible protein protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 79 VNTALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYNKLV 234
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVKVDNN*KLGE 300
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>L24498-1|AAA72045.1| 165|Homo sapiens gadd45 protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 79 VNTALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYNKLV 234
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVKVDNN*KLGE 300
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>BC011757-1|AAH11757.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 79 VNTALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYNKLV 234
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVKVDNN*KLGE 300
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>AY135686-1|AAM88884.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 79 VNTALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYNKLV 234
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVKVDNN*KLGE 300
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>AL136120-2|CAI23494.1| 165|Homo sapiens growth arrest and
DNA-damage-inducible, alpha protein.
Length = 165
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Frame = +1
Query: 79 VNTALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE------AAYNKLV 234
V AL+EVL AL + G++EAAK L D VLC+LA + D+ + L+
Sbjct: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
Query: 235 QALCNEHQIPLVKVDNN*KLGE 300
QA C E+ I +++V N +L E
Sbjct: 79 QAFCCENDINILRVSNPGRLAE 100
>CR457038-1|CAG33319.1| 159|Homo sapiens GADD45G protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BT007234-1|AAP35898.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BC019325-1|AAH19325.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BC000465-1|AAH00465.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AL161910-2|CAH71791.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AL161910-1|CAH71790.1| 141|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 141
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 7 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 66
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 67 CCENDIDIVRVGDVQRLAAIVG 88
>AF494037-1|AAM00007.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible, gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF265659-1|AAF73468.1| 159|Homo sapiens GADD45 gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF079806-1|AAD28544.1| 159|Homo sapiens cytokine responsive
protein protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF078078-1|AAC83329.1| 159|Homo sapiens growth arrest and
DNA-damage-inducible protein GADD45gamma protein.
Length = 159
Score = 35.9 bits (79), Expect = 0.051
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>D83023-1|BAA84543.1| 159|Homo sapiens gadd45-related protein
protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.088
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAHGQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>AF087883-1|AAK00414.1| 159|Homo sapiens growth arrest and DNA
damage inducible protein gamma protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.088
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 88 ALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDEAA------YNKLVQAL 243
AL E+L +A G L G++E+AK L D CVLA ++ + L+QA
Sbjct: 25 ALHELLLSAHGQGCLTAGVYESAKVLNVDPDNVTFCVLAAGEEDEGDIALQIHFTLIQAF 84
Query: 244 CNEHQIPLVKVDNN*KLGEWAG 309
C E+ I +V+V + +L G
Sbjct: 85 CCENDIDIVRVGDVQRLAAIVG 106
>BC038953-1|AAH38953.1| 444|Homo sapiens COG3 protein protein.
Length = 444
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 76 DVNTALQEV---LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDE-AAYNKLVQAL 243
DVN+ALQ + K L LHEA + L K Q+ L LAEN + +Y ++ +
Sbjct: 147 DVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETI 206
Query: 244 CNEHQIPLVKVDNN 285
+ P + V+++
Sbjct: 207 NTKLNSPTLSVNSD 220
>AL606514-2|CAH73267.1| 828|Homo sapiens component of oligomeric
golgi complex 3 protein.
Length = 828
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 76 DVNTALQEV---LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDE-AAYNKLVQAL 243
DVN+ALQ + K L LHEA + L K Q+ L LAEN + +Y ++ +
Sbjct: 147 DVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETI 206
Query: 244 CNEHQIPLVKVDNN 285
+ P + V+++
Sbjct: 207 NTKLNSPTLSVNSD 220
>AL139326-1|CAH72888.1| 828|Homo sapiens component of oligomeric
golgi complex 3 protein.
Length = 828
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 76 DVNTALQEV---LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDE-AAYNKLVQAL 243
DVN+ALQ + K L LHEA + L K Q+ L LAEN + +Y ++ +
Sbjct: 147 DVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETI 206
Query: 244 CNEHQIPLVKVDNN 285
+ P + V+++
Sbjct: 207 NTKLNSPTLSVNSD 220
>AF349676-1|AAK66974.1| 828|Homo sapiens vesicle docking protein
SEC34 protein.
Length = 828
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 76 DVNTALQEV---LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDE-AAYNKLVQAL 243
DVN+ALQ + K L LHEA + L K Q+ L LAEN + +Y ++ +
Sbjct: 147 DVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETI 206
Query: 244 CNEHQIPLVKVDNN 285
+ P + V+++
Sbjct: 207 NTKLNSPTLSVNSD 220
>AF332595-1|AAK06848.1| 828|Homo sapiens tethering factor SEC34
protein.
Length = 828
Score = 29.5 bits (63), Expect = 4.4
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 76 DVNTALQEV---LKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDE-AAYNKLVQAL 243
DVN+ALQ + K L LHEA + L K Q+ L LAEN + +Y ++ +
Sbjct: 147 DVNSALQHLESLQKQYLFVSNKTGTLHEACEQLLKEQSELVDLAENIQQKLSYFNELETI 206
Query: 244 CNEHQIPLVKVDNN 285
+ P + V+++
Sbjct: 207 NTKLNSPTLSVNSD 220
>AK074886-1|BAC11267.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ90405 fis, clone NT2RP2006099. ).
Length = 207
Score = 29.1 bits (62), Expect = 5.8
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 93 PGSS*NGPYPRWISAWTSRGCQGFGQEASCPMCTG*EL*RGSLQQACSGSL**TSNPTC 269
PG S +G +AW G + GQ +CP C RG Q+A SG P C
Sbjct: 33 PGQSGHGHRQETATAWAGAGERSAGQGPTCPRCAR-AASRGR-QRATSGPRRSPRRPRC 89
>AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein.
Length = 5061
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 167 TRGKLSYVYWLRTVTRQPTTSLFRLSVMNIKSHLLRSITIRSSANGPVSVK 319
T L+Y+ L R P T L+ L + + +S L+ S T ++ N +SVK
Sbjct: 747 THENLTYLQLLERCVRDPETGLYLLPLSSTQSPLVDSATQQAFQNLLLSVK 797
>AB051895-1|BAB40803.1| 5065|Homo sapiens epiplakin 1 protein.
Length = 5065
Score = 29.1 bits (62), Expect = 5.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 167 TRGKLSYVYWLRTVTRQPTTSLFRLSVMNIKSHLLRSITIRSSANGPVSVK 319
T L+Y+ L R P T L+ L + + +S L+ S T ++ N +SVK
Sbjct: 747 THENLTYLQLLERCVRDPETGLYLLPLSSTQSPLVDSATQQAFQNLLLSVK 797
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,181,267
Number of Sequences: 237096
Number of extensions: 1191964
Number of successful extensions: 2389
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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