Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B04
         (442 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF9 Cluster: Putative uncharacterized protein; n=1; ...    75   7e-13
UniRef50_Q9KQW8 Cluster: Rec2-related protein; n=18; Vibrio chol...    36   0.51 
UniRef50_Q5BBK2 Cluster: Putative uncharacterized protein; n=1; ...    35   0.89 
UniRef50_Q9M291 Cluster: Protein transport protein Sec24-like CE...    34   1.6  
UniRef50_A2ECL1 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_Q9VZG4 Cluster: CG15005-PA; n=2; Sophophora|Rep: CG1500...    32   6.3  
UniRef50_P57740 Cluster: Nuclear pore complex protein Nup107; n=...    32   6.3  
UniRef50_A4H431 Cluster: 31-O-demethyl-FK506 methyltransferase; ...    31   8.3  

>UniRef50_Q5MGF9 Cluster: Putative uncharacterized protein; n=1;
           Lonomia obliqua|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 88

 Score = 74.9 bits (176), Expect = 7e-13
 Identities = 38/67 (56%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
 Frame = +1

Query: 79  VHVVDNSG-------VVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDN 237
           V VVDNS         VI+NPDPFFSQPSNGP+G Y+     PAFVD ++   P K YD+
Sbjct: 22  VQVVDNSNQVPSDGQFVISNPDPFFSQPSNGPNGGYQQPDISPAFVDNSNQYRPQKHYDH 81

Query: 238 PLARGGK 258
           P ARGGK
Sbjct: 82  PGARGGK 88


>UniRef50_Q9KQW8 Cluster: Rec2-related protein; n=18; Vibrio
           cholerae|Rep: Rec2-related protein - Vibrio cholerae
          Length = 752

 Score = 35.5 bits (78), Expect = 0.51
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 44  SSPYWPWLPQTEFTWWTIVVLLL 112
           S+PYWPW+P   + W  ++V++L
Sbjct: 24  SAPYWPWMPSWGWAWLCLIVMVL 46


>UniRef50_Q5BBK2 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 1458

 Score = 34.7 bits (76), Expect = 0.89
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +1

Query: 121 DPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYP 219
           D  F QPSNG  GN E I   P F++ N P+ P
Sbjct: 527 DQNFDQPSNG--GNMEDIQESPGFIESNKPDVP 557


>UniRef50_Q9M291 Cluster: Protein transport protein Sec24-like CEF;
           n=4; Arabidopsis thaliana|Rep: Protein transport protein
           Sec24-like CEF - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1097

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +1

Query: 97  SGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLARGG 255
           SG ++A P P+   P+ GP     P+S+ PA       N+P   Y  P   GG
Sbjct: 243 SGPMMAPPPPYGQPPNAGPFTGNSPLSSPPAHSIPAPTNFPGVPYGRPPMPGG 295


>UniRef50_A2ECL1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 713

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           NP   +   + GP+  + P ++GP ++  N PNYPP
Sbjct: 309 NPQNQYPNNNRGPNPIFNP-NSGPGYMQRNPPNYPP 343


>UniRef50_Q9VZG4 Cluster: CG15005-PA; n=2; Sophophora|Rep:
           CG15005-PA - Drosophila melanogaster (Fruit fly)
          Length = 750

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P P +SQP   PS +Y+  +  P+      P +P   Y+ P
Sbjct: 339 HPPPSYSQPPQHPSSSYDQPAQHPSSSYDQPPKHPSSSYEQP 380


>UniRef50_P57740 Cluster: Nuclear pore complex protein Nup107; n=41;
           Gnathostomata|Rep: Nuclear pore complex protein Nup107 -
           Homo sapiens (Human)
          Length = 925

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 29  LSCFSSSPYWPWLPQTEFTWWTIVVLLLRTRILSSLNHQTVLA 157
           L  FS +    WL Q E   W ++  L R RI S+L  ++V A
Sbjct: 199 LQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEEESVFA 241


>UniRef50_A4H431 Cluster: 31-O-demethyl-FK506 methyltransferase;
           n=1; Leishmania braziliensis|Rep: 31-O-demethyl-FK506
           methyltransferase - Leishmania braziliensis
          Length = 353

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = -2

Query: 291 VLKSLIFMRHLL--PTTGERVVVSLGWIIGMIEIDERRSSAYGFIISARTV*WL 136
           + K +++ RH +  P TG  +V+ +G  IG+  +     + +  +++A  + WL
Sbjct: 65  IFKDMVYKRHGIDIPVTGSPLVIDVGCNIGLFSMFVLEVNPHAVVVAAEPIPWL 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,291,129
Number of Sequences: 1657284
Number of extensions: 7130905
Number of successful extensions: 18914
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18896
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)