Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B04
         (442 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001593-1|AAN71348.1|  750|Drosophila melanogaster RE27538p pro...    32   0.40 
AE014296-790|AAF47859.2|  750|Drosophila melanogaster CG15005-PA...    32   0.40 
U89385-1|AAB49892.1|  534|Drosophila melanogaster LIM homeobox p...    31   0.70 
AF145674-1|AAD38649.1|  465|Drosophila melanogaster tailup protein.    31   0.70 
AE014134-2994|AAN11018.1|  465|Drosophila melanogaster CG10619-P...    31   0.70 
AE014134-2993|AAF53720.1|  534|Drosophila melanogaster CG10619-P...    31   0.70 
DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 prot...    28   6.5  
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro...    27   8.6  
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ...    27   8.6  
AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-P...    27   8.6  

>BT001593-1|AAN71348.1|  750|Drosophila melanogaster RE27538p
           protein.
          Length = 750

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P P +SQP   PS +Y+  +  P+      P +P   Y+ P
Sbjct: 339 HPPPSYSQPPQHPSSSYDQPAQHPSSSYDQPPKHPSSSYEQP 380



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P   + QP   PS +YE     P+      P +P   YD P
Sbjct: 361 HPSSSYDQPPKHPSSSYEQPPQHPSSSYDQPPQHPSSSYDQP 402



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P   + QP+  PS +Y+     P+      P +P   YD P
Sbjct: 350 HPSSSYDQPAQHPSSSYDQPPKHPSSSYEQPPQHPSSSYDQP 391



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = +1

Query: 82  HVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           H   NS     +P   + QP   PS +Y+     P       P +P   YD P
Sbjct: 306 HPPTNSYAPPQHPSSSYDQPPQHPSSSYDQPPQHPPPSYSQPPQHPSSSYDQP 358


>AE014296-790|AAF47859.2|  750|Drosophila melanogaster CG15005-PA
           protein.
          Length = 750

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P P +SQP   PS +Y+  +  P+      P +P   Y+ P
Sbjct: 339 HPPPSYSQPPQHPSSSYDQPAQHPSSSYDQPPKHPSSSYEQP 380



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P   + QP   PS +YE     P+      P +P   YD P
Sbjct: 361 HPSSSYDQPPKHPSSSYEQPPQHPSSSYDQPPQHPSSSYDQP 402



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +1

Query: 115 NPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           +P   + QP+  PS +Y+     P+      P +P   YD P
Sbjct: 350 HPSSSYDQPAQHPSSSYDQPPKHPSSSYEQPPQHPSSSYDQP 391



 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/53 (28%), Positives = 20/53 (37%)
 Frame = +1

Query: 82  HVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNP 240
           H   NS     +P   + QP   PS +Y+     P       P +P   YD P
Sbjct: 306 HPPTNSYAPPQHPSSSYDQPPQHPSSSYDQPPQHPPPSYSQPPQHPSSSYDQP 358


>U89385-1|AAB49892.1|  534|Drosophila melanogaster LIM homeobox
           protein protein.
          Length = 534

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 73  NRVHVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           N++H  D +G+ I  P P  S P+ GP   + P   GP       PN  P
Sbjct: 382 NQMHGYDLNGMPILPPHPH-SHPAQGPPHQHPPPPGGPHNHQNQQPNQQP 430


>AF145674-1|AAD38649.1|  465|Drosophila melanogaster tailup protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 73  NRVHVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           N++H  D +G+ I  P P  S P+ GP   + P   GP       PN  P
Sbjct: 382 NQMHGYDLNGMPILPPHPH-SHPAQGPPHQHPPPPGGPHNHQNQQPNQQP 430


>AE014134-2994|AAN11018.1|  465|Drosophila melanogaster CG10619-PB,
           isoform B protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 73  NRVHVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           N++H  D +G+ I  P P  S P+ GP   + P   GP       PN  P
Sbjct: 382 NQMHGYDLNGMPILPPHPH-SHPAQGPPHQHPPPPGGPHNHQNQQPNQQP 430


>AE014134-2993|AAF53720.1|  534|Drosophila melanogaster CG10619-PA,
           isoform A protein.
          Length = 534

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 73  NRVHVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 222
           N++H  D +G+ I  P P  S P+ GP   + P   GP       PN  P
Sbjct: 382 NQMHGYDLNGMPILPPHPH-SHPAQGPPHQHPPPPGGPHNHQNQQPNQQP 430


>DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156
           protein.
          Length = 1412

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 73  NRVHVVDNSGVVIANPDPFFSQPSNGPSGNYEPISTG 183
           +R+    N   ++A PD    +  N P+G+  P++ G
Sbjct: 803 SRIARKPNESTLVAQPDVTMEEAENQPAGSVTPVTAG 839


>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p
           protein.
          Length = 1425

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 94  NSGVVIANPDPFFSQPSNGPSGNYEPISTG 183
           N   ++A PD    +  N P+G+  P++ G
Sbjct: 817 NESTLVAQPDVTMEEAENQPAGSVTPVTAG 846


>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
           protein MUS101 protein.
          Length = 1425

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 94  NSGVVIANPDPFFSQPSNGPSGNYEPISTG 183
           N   ++A PD    +  N P+G+  P++ G
Sbjct: 817 NESTLVAQPDVTMEEAENQPAGSVTPVTAG 846


>AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-PA
           protein.
          Length = 1425

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 94  NSGVVIANPDPFFSQPSNGPSGNYEPISTG 183
           N   ++A PD    +  N P+G+  P++ G
Sbjct: 817 NESTLVAQPDVTMEEAENQPAGSVTPVTAG 846


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,173,877
Number of Sequences: 53049
Number of extensions: 333910
Number of successful extensions: 923
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)