Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_B02
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    42   3e-06
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    24   0.98 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    24   0.98 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.3  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   5.2  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   5.2  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.1  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   9.1  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 42.3 bits (95), Expect = 3e-06
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 6/181 (3%)
 Frame = +1

Query: 94   QPAEVLFKENNPTVLECLIEGNDQGVKYSWQK-----DGKSFNWQEHNAALRKDEGSLVF 258
            +P +  F + +   +EC  +G  + V  +W++      G   +++ +N  ++ ++G+L  
Sbjct: 704  EPTDKAFAQGSDAAVECKADGFPRPV-VTWKRATGVSPGDYKDFKPNNPDIKVEDGTLTI 762

Query: 259  LRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPN 438
               Q ++EG Y C A    G   S VI            K   +T   G P  L C    
Sbjct: 763  NNIQKTNEGYYLCEAVNGIGSGLSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCEAKG 822

Query: 439  AYPKPL-ITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVRDIYQYVCTAXN 615
               KP+ I W       +P  D   +  R     +G L    + + +  D   + C A N
Sbjct: 823  --EKPIGILWNINNKRLEPKGD-NRYTIREEILANGVLSGLSIKRTERSDSALFTCVATN 879

Query: 616  A 618
            A
Sbjct: 880  A 880



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 39/142 (27%), Positives = 54/142 (38%), Gaps = 6/142 (4%)
 Frame = +1

Query: 88  KDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRP 267
           K +P         P    C  EGN      SW KDG      +HN A+ + E        
Sbjct: 331 KIEPQVQTIDFGRPATFTCNFEGNPIKT-ISWLKDGHPI---DHNEAVLRIESV------ 380

Query: 268 QASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTH---EKTPIEGRPFQLDCVQPN 438
           +  D+G YQCF       A +     +       P   H   E+T   G    L C+  +
Sbjct: 381 RKEDKGMYQCFIRNDQESAEA-TAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCI-AS 438

Query: 439 AYPKPLITWK---KRLSGADPN 495
             P P ITW+   +RLS ++ N
Sbjct: 439 GNPTPEITWELYGRRLSNSERN 460



 Score = 26.6 bits (56), Expect = 0.18
 Identities = 22/95 (23%), Positives = 35/95 (36%)
 Frame = +1

Query: 220 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 399
           N  +++  G+L+    +  D G+Y C      G  S   +    T  + +  +   +T  
Sbjct: 282 NDRVKQVAGTLIIREAKVEDSGKYLCVVNNSVGGESVETV-LTVTAPLKAKIEPQVQTID 340

Query: 400 EGRPFQLDCVQPNAYPKPLITWKKRLSGADPNADV 504
            GRP    C      P   I+W K     D N  V
Sbjct: 341 FGRPATFTC-NFEGNPIKTISWLKDGHPIDHNEAV 374



 Score = 23.8 bits (49), Expect = 1.3
 Identities = 19/76 (25%), Positives = 30/76 (39%)
 Frame = +1

Query: 91   DQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQ 270
            D      +KE+    L CL  G    V  +W+  G  F   +     ++ +GSL      
Sbjct: 1313 DDTFTTTYKED--VTLPCLAVGLPPPV-ITWKIKGVQFTTSDK--IRQQPDGSLFIRDVS 1367

Query: 271  ASDEGQYQCFAETPAG 318
             ++ G+Y C  E   G
Sbjct: 1368 RNNAGEYSCHVENDYG 1383



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +1

Query: 181 WQKDGKSFNWQEHNAALRKDEGSLVFLRPQ-ASDEGQYQCFAETPAGVAS 327
           W++DG+               G+L+    + ASD+  Y C A+   G ++
Sbjct: 544 WERDGRQLPINRKQKVFIN--GTLIIENVERASDQATYDCVAKNSQGYSA 591


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +3

Query: 321 CQLEGDQLQEDLPHRIASEDTRENANRRQ 407
           C  EG++L++D+P  + +E  + N   ++
Sbjct: 52  CTPEGEELKKDIPDALQNECAKCNEKHKE 80


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 321 CQLEGDQLQEDLPHRIASEDTRENANRRQ 407
           C  EG++L+ D+P  + +E  + N   ++
Sbjct: 53  CTPEGEELKRDIPEALQNECAKCNEKHKE 81


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 257 NTRDPSSLRRAALCSCQLKDFPSFCQEYLTP*SFPSMRHS 138
           +T +P+ L    + + ++KDFPS       P  FPS+ +S
Sbjct: 217 HTGEPTDLTPEQIQAAEVKDFPS-------PGGFPSIHNS 249


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +3

Query: 45  NCGLSASRG*IPGAERPTGRGPLQGEQPNGPRMSHRRKRSGSQ 173
           +C L A+     G   PTG  PL  +  N   M H  +    Q
Sbjct: 135 SCKLQAAAVTQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQ 177


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +3

Query: 45  NCGLSASRG*IPGAERPTGRGPLQGEQPNGPRMSHRRKRSGSQ 173
           +C L A+     G   PTG  PL  +  N   M H  +    Q
Sbjct: 137 SCKLQAAAVTQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQ 179


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
 Frame = +1

Query: 37  ACIIVGSALPVDKYPVLKDQP--AEVLFKEN-NPTVLECLIE 153
           AC+ V  A P D+Y +  D     E+L  +      + CL+E
Sbjct: 10  ACVSVALARPEDQYTIKYDNVNLKEILQSDRLTENYVNCLLE 51


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 321 CQLEGDQLQEDLPHRIASEDTRENANRRQ 407
           C  EG++L++D+P  + +   + N   ++
Sbjct: 53  CTPEGEELKKDIPEALQNGCAKCNEKHKE 81


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +3

Query: 321 CQLEGDQLQEDLPHRIASEDTRENANRRQ 407
           C  EG++L++D+P  + +   + N   ++
Sbjct: 53  CTPEGEELKKDIPEALQNGCAKCNEKHKE 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 548 RFPSGPAVMRRSKSVTS 498
           R+PSGP +  RS + T+
Sbjct: 36  RYPSGPELSDRSAAYTN 52


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 90  RPTGRGPLQGEQPNGPRMSHRRKR 161
           R TGRG     Q +GP+   R ++
Sbjct: 13  RSTGRGLKYSGQQHGPQSDSRNQQ 36



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 352 TYLIASPAKTHEKTPIEGRPF 414
           T+      K H+KTP   RP+
Sbjct: 291 THKYTHEIKLHDKTPFLKRPY 311


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 85  APGIYPREALSP 50
           +PGIY  ++LSP
Sbjct: 196 SPGIYSEQSLSP 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,100
Number of Sequences: 336
Number of extensions: 3553
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)