Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B02
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 30 0.35
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 29 0.46
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 27 2.4
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 26 4.3
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 7.5
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.9
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 9.9
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 25 9.9
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 9.9
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 25 9.9
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.9
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 29.9 bits (64), Expect = 0.35
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 194 GNLSTGRSITLLSAKMKDPWYS*DRKRLTRANTNASLK 307
G+L G LL + PWY D R+TRA L+
Sbjct: 458 GDLHNGHYYALLKTEKDGPWYKYDDTRVTRATLREVLE 495
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 0.46
Identities = 26/98 (26%), Positives = 42/98 (42%)
Frame = +1
Query: 124 NPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFA 303
NP V + GN+Q +S D ++N NA + LR + + +
Sbjct: 534 NPRVTRFNV-GNEQ---FSNNIDNNNYNQPYANATMNNSRR----LRTPSGERSMRADLS 585
Query: 304 ETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQ 417
++PA S V R+ + SP+ T +K + G PFQ
Sbjct: 586 QSPASYDSLNVPKHRRRQSLFSPSSTKKK--LSGSPFQ 621
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 13 SKSIAVLSACIIVGSALPVDKYPVLKDQPAE 105
SKSIA L CI +G + P K PV+K Q E
Sbjct: 57 SKSIAKLDLCIELGRSYPYVK-PVIKLQNGE 86
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 463 WKKR--LSGADPNADVTDFDRRITAGPDGN 546
WK+ ++ +PNA +T F+R + DGN
Sbjct: 458 WKRTDDIASGEPNAILTSFNRNFRSRNDGN 487
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 460 TWKKRLSGADPNADV 504
TW+KRL G N DV
Sbjct: 1468 TWRKRLEGCQKNVDV 1482
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = -3
Query: 618 CVLGGAYVLINVTDVFFSDDCEVEVSIRPSCDAAIKVSHISVRISSGQTFLPSNQGF 448
C +G Y +IN+ + FS+ + P + +S S+ +P NQ F
Sbjct: 281 CTIGSIYGMINLVLIAFSEVWKSSYDFSPGISGLMYISITLGLFSAVFIAMPINQKF 337
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.0 bits (52), Expect = 9.9
Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Frame = -3
Query: 567 SDDCEVEVSIRPSCDAAIKVSHISVRISSGQTFLPSNQGFRVSVRLHTVQLERPAFDWRF 388
SD V VSI P+ + I+V +S+ + TF+ + + + ++ E D +
Sbjct: 305 SDLVSVFVSIMPNNGSKIRVQQLSLSLVEYITFIHPSSSSPIVRKKKVLRYEEDLDDMKL 364
Query: 387 LVCLRWRCDEVSLPEADHPRAGNTGW-GFSEXXXXXXXXXXRSQEYQGSFIFAESSVMLL 211
+ P+ D A TG+ S+ + Q Y+ I + +++
Sbjct: 365 TSEGLSKSLSKPFPDIDFEDANITGFTTTSDLYSVQYMLVIKVQLYRARNIEITNPIIVS 424
Query: 210 PVER 199
PVER
Sbjct: 425 PVER 428
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 366 IASEDTRENANRRQAFPIGLCAAERL 443
I + DT A RRQ F L AAER+
Sbjct: 474 IFNNDTLSRAERRQRFRQSLRAAERI 499
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 340 SFRKTYLIASPAKTHEKTP 396
+FRKTYL AS A H P
Sbjct: 585 AFRKTYLFASNAGIHINAP 603
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = -3
Query: 618 CVLGGAYVLINVTDVFFSDDCEVEVSIRPSCDAAIKVSHISVRISSGQTFLPSNQGF 448
C +G Y +IN+ + FS+ + P + +S S+ +P NQ F
Sbjct: 281 CTIGSIYGMINLVLIAFSEVWKSSYDFSPGISGLMYISITLGLFSAVFIAMPINQKF 337
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/57 (24%), Positives = 24/57 (42%)
Frame = -3
Query: 618 CVLGGAYVLINVTDVFFSDDCEVEVSIRPSCDAAIKVSHISVRISSGQTFLPSNQGF 448
C +G Y +IN+ + FS+ + P + +S S+ +P NQ F
Sbjct: 281 CTIGSIYGMINLVLIAFSEVWKSSYDFSPGISGLMYISITLGLFSAVFIAMPINQKF 337
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,714,774
Number of Sequences: 5004
Number of extensions: 57498
Number of successful extensions: 177
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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