Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B01
(605 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 59 2e-09
01_06_0824 - 32243495-32244319,32244449-32244859 58 5e-09
11_01_0750 - 6315126-6315896,6316371-6316784 55 4e-08
01_01_1152 + 9170628-9171899 55 4e-08
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 52 4e-07
11_01_0767 + 6438648-6438809,6439146-6440000 50 1e-06
11_02_0011 - 7337618-7338496,7338596-7338991 48 4e-06
11_01_0771 + 6453130-6454488 48 4e-06
11_02_0012 - 7346282-7347136,7347234-7347593 45 4e-05
11_02_0014 - 7352619-7352918,7353173-7353418 42 4e-04
05_06_0044 - 25150322-25151260 40 0.001
11_03_0058 - 9380926-9381062,9382003-9382413,9382561-9382786 30 1.6
02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091 29 3.8
10_08_0960 - 21853010-21853282,21854078-21854449,21854555-218548... 28 5.0
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 28 5.0
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 28 5.0
08_01_0978 + 9841441-9842169,9842303-9842590,9842768-9843612,984... 28 6.6
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 27 8.7
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +2
Query: 245 ETIDFSDTKKAADI---INQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVP 415
E I + KAA++ +N W + T G IK + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEK 259
Query: 416 FNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESG 568
F+AS+TK+ +FH+ V+ P MS + + L ++++LPY++ G
Sbjct: 260 FDASKTKDGEFHLLDGKSVQAPFMSTSKKQYILSYDNL--KVLKLPYQQGG 308
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/130 (23%), Positives = 61/130 (46%)
Frame = +2
Query: 179 VGNKYTLDEKFTITVRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDP 358
+ + D F +++ + V + +N W + T G IK+ + +I+
Sbjct: 433 IAEDFVADHPFLFLIQEDMTGVVLFVGHVAAEVLGQVNSWVDRVTSGLIKNIATPRSINH 492
Query: 359 NAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQ 538
N L N ++F+G W F+ S+T++ +FH+ V+ P MS + + + L +
Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTRKKQYLSSYDSL--K 550
Query: 539 LVELPYKESG 568
+++LPY + G
Sbjct: 551 VLKLPYLQGG 560
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 58.0 bits (134), Expect = 5e-09
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 11/173 (6%)
Frame = +2
Query: 5 SEHDQVMFIG-GYRGLQRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNPD------YF 157
S H + +G G RG +I FLG G +++L + P
Sbjct: 40 SLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPGDDRGGPKV 99
Query: 158 TMANKIYVGNKYTLDEKFT-ITVRQYQSEVETIDFSDT-KKAADIINQWANEKTRGHIKS 331
AN ++V L + + +Y++E + F D ++A IN+W T G IK
Sbjct: 100 RFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFESATAGRIKD 159
Query: 332 PISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMS 490
+ D +D A L N ++F+G W F+A T + F++ V P MS
Sbjct: 160 FLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFMS 212
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 55.2 bits (127), Expect = 4e-08
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Frame = +2
Query: 32 GGYRGLQRAEIDKFLG--NGDYSGVANPYISLSKTFSEMNPDYFT-------MANKIYVG 184
GG RG R ++ + LG G G A+ S+ + D T A ++
Sbjct: 50 GGARGATRRQVLQALGCGGGGRGGAADAANVASRVVKRVLRDRSTSGGPRLAFAGGVWAD 109
Query: 185 NKYTLDEKFT-ITVRQYQSEVETIDFSDTKK-AADIINQWANEKTRGHIKSPISDDTIDP 358
+L +F + Y S + DF + + A D IN W + T+G + + + TID
Sbjct: 110 ASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLLPAGTIDQ 169
Query: 359 NAAAALFNVIFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQ 538
N L + ++F+G W + T E+ F+ T V+ P + + + + +
Sbjct: 170 NTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDRTRLFAVHDNF--K 227
Query: 539 LVELPYKE 562
+++LPYK+
Sbjct: 228 VIKLPYKQ 235
>01_01_1152 + 9170628-9171899
Length = 423
Score = 55.2 bits (127), Expect = 4e-08
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Frame = +2
Query: 35 GYRGLQRAEIDKFLGNGDYSGV-ANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKF 211
G RG + E+ FLG+ + + +P L + F ++V L +F
Sbjct: 78 GARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTSFACG--VWVDRGRALTPEF 135
Query: 212 T-ITVRQYQSEVETIDFS-DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNV 385
+Y + E DF+ ++A + +N + ++ T G I+ + +++D + L N
Sbjct: 136 ADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIRDVLPPNSVDSSTVVVLANA 195
Query: 386 IFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKES 565
+ F+G W +PF+ S T FH+ V+ P M+ P ++LPYK
Sbjct: 196 VHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYKNV 255
Query: 566 G 568
G
Sbjct: 256 G 256
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/97 (27%), Positives = 50/97 (51%)
Frame = +2
Query: 272 KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDFH 451
+ A +N W + T G IK + ++D L N ++F+G W F+AS+TK+ +F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 452 VDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKE 562
+ V P MS + + + L ++++LPY++
Sbjct: 64 LLDGKSVLAPFMSTSKKQYLSSYDSL--KVLKLPYQK 98
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +2
Query: 221 VRQYQSEVETIDFSDTK-KAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQ 397
V Y+ T+DF + +A IN W T+ I I ++ + + N I+F+
Sbjct: 39 VGTYKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFK 98
Query: 398 GHWHVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYK 559
G W PF+ S+T E++F + V+ P M ++ +++ LPYK
Sbjct: 99 GEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYK 152
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 48.4 bits (110), Expect = 4e-06
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = +2
Query: 230 YQSEVETIDFS-DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHW 406
Y++ +F K++ IN+W ++ T I + D ++ + A L N I+F+G W
Sbjct: 120 YKAVTRAANFQRQPKRSRKKINKWVSKATNKLIPEILPDGSVHVDTALVLVNAIYFKGKW 179
Query: 407 HVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKESGFRNVG 583
PF S T FH + V P MS + + + +++LPY +N G
Sbjct: 180 SNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHDGF--TVLKLPYHHRTMKNHG 236
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +2
Query: 269 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 448
++A IN WA T I + ++ P A L N I+F+G W PFN S+T+ K F
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPF 230
Query: 449 H 451
+
Sbjct: 231 Y 231
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 269 KKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 448
K + IN+W ++ T I+ + D ++ A L N I+F+G W PF T F
Sbjct: 122 KSSRKKINKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKF 181
Query: 449 HVDSTTIVKKPTMS 490
H + V P MS
Sbjct: 182 HRLDGSSVDAPFMS 195
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 263 DTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEK 442
+ KK+ IN+W ++ T I + D ++ L N I+F+G W PF T
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTG 141
Query: 443 DFH-VDSTTI 469
FH +D +++
Sbjct: 142 KFHRLDGSSV 151
>05_06_0044 - 25150322-25151260
Length = 312
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Frame = +2
Query: 287 INQWANEKTRGHIKSPIS---DDTIDPN--------AAAALFNVIFFQGHWHVPFNASET 433
IN+W + +T G +K +S DD D + A+ L N ++F +W PF T
Sbjct: 40 INEWFSSQTGGFVKDILSNSIDDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLT 99
Query: 434 KEKDFHVDSTTIVKKPTMS 490
+E DFHV V+ P M+
Sbjct: 100 EEGDFHVSPDHDVRVPFMA 118
>11_03_0058 - 9380926-9381062,9382003-9382413,9382561-9382786
Length = 257
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -3
Query: 564 DSLYGNSTSC--ASSSLFSV*NNGCSRLMVGFFTMVVES 454
D++ N+T+C S SL + GCSR++ GF V+++
Sbjct: 196 DAMDTNATACFATSESLAGIYGEGCSRVVAGFVLSVLKA 234
>02_05_0043 - 25366965-25368211,25368555-25369070,25369185-25370091
Length = 889
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 128 FYLS*CTDWQPRYNLHCLKTC 66
+ L CTD+ P+Y HC +C
Sbjct: 296 YLLDGCTDYNPKYKEHCSTSC 316
>10_08_0960 -
21853010-21853282,21854078-21854449,21854555-21854862,
21854946-21855102
Length = 369
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 299 ANEKTRGHIKSPISDDTIDPNAAAA 373
A + RG KSP DD I+PNAAAA
Sbjct: 241 AAAQARGS-KSPEDDDNINPNAAAA 264
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 44 GLQRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYV-GNKYT 196
G A+ D GD V + + L+ F E++PD+ ++N +Y+ G+ Y+
Sbjct: 150 GFSYADTDAGFRTGDTIAVHHILVFLNNWFQEVHPDF--LSNPLYIAGDSYS 199
>08_02_0095 -
12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/85 (20%), Positives = 37/85 (43%)
Frame = -2
Query: 379 EERGSCIRIYGVIRDWRFNMSSGLLISPLINDVSCFFGIAEVNSFNFALVLTDSDREFLI 200
EE G CI R R+NM + + + +C FG A + + F + +F +
Sbjct: 625 EEYGDCISFDTTYRTNRYNMPFAPFVGVIGHGTTCLFGCAFLEA-EFESLWPQMIEKFNL 683
Query: 199 QSIFISDVDFIGHSEVIRIHLRERF 125
Q++ + + ++ + ++ + F
Sbjct: 684 QNVNYLKIMWKNRAQFVPVYFKYDF 708
>08_01_0978 +
9841441-9842169,9842303-9842590,9842768-9843612,
9843941-9844223,9844303-9844416
Length = 752
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 227 QYQSEVETIDFSDTKKA-ADIINQWANEKTRGHIKSPISDDTID-PNAA 367
++ E E + S+T++ ADI QWA R +K SD+T+ PN A
Sbjct: 188 EWDKEDEAVAESNTQQVLADIPVQWARNWARARVKKN-SDETLSFPNPA 235
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -2
Query: 490 THGWL---LHDGCRVNMEIFLFSFTCVE 416
T WL L GCRV ++ FLFSF E
Sbjct: 178 TSEWLNEVLPSGCRVGIDPFLFSFDAAE 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,074,100
Number of Sequences: 37544
Number of extensions: 319081
Number of successful extensions: 821
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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