Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_B01
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 82 3e-16
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 82 3e-16
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 72 4e-13
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 72 4e-13
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 62 4e-10
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 62 4e-10
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 62 4e-10
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 62 4e-10
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 62 4e-10
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 62 4e-10
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 58 6e-09
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 58 6e-09
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 28 4.5
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 28 4.5
AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans alpha-1->3-fu... 28 5.9
AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl trans... 28 5.9
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 7.9
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 27 7.9
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 27 7.9
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 27 7.9
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 27 7.9
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 82.2 bits (194), Expect = 3e-16
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Frame = +2
Query: 35 GYRGLQRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPDYFTM-ANKIYVGNKYTLDEK 208
G +G R +I + NG + S ++K + D T+ AN+++V + + +
Sbjct: 48 GAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETLIANRLFVSPEQAIRKA 107
Query: 209 FTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNV 385
FT +R+ Y +E TIDF +++AA I+NQ+ +E T+G I I D + + A L N
Sbjct: 108 FTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNL-KDVDAILINA 166
Query: 386 IFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKE 562
IFFQG W F E E +F + +T P + + FY NK+ E Q++ +P+K+
Sbjct: 167 IFFQGDWRRKF--GEPAESNFSISATENRLVPMLRETRDYFY--NKDDEWQVIGIPFKD 221
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 82.2 bits (194), Expect = 3e-16
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 3/179 (1%)
Frame = +2
Query: 35 GYRGLQRAEIDKFLGNGDYSGVANPYIS-LSKTFSEMNPDYFTM-ANKIYVGNKYTLDEK 208
G +G R +I + NG + S ++K + D T+ AN+++V + + +
Sbjct: 48 GAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNSSVNDVETLIANRLFVSPEQAIRKA 107
Query: 209 FTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNV 385
FT +R+ Y +E TIDF +++AA I+NQ+ +E T+G I I D + + A L N
Sbjct: 108 FTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNL-KDVDAILINA 166
Query: 386 IFFQGHWHVPFNASETKEKDFHVDSTTIVKKPTMSLLQPLFYTENKELEAQLVELPYKE 562
IFFQG W F E E +F + +T P + + FY NK+ E Q++ +P+K+
Sbjct: 167 IFFQGDWRRKF--GEPAESNFSISATENRLVPMLRETRDYFY--NKDDEWQVIGIPFKD 221
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 71.7 bits (168), Expect = 4e-13
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Frame = +2
Query: 41 RGLQRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKF 211
+G R EI K L NG + IS +E + +AN I+ +T+ + +
Sbjct: 53 KGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEV-NVANHIFSRKTFTIKKLY 111
Query: 212 TITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVI 388
V++ Y + ++F D + +A+ IN + +E T+GHIK I+ D+I A L N
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAF 171
Query: 389 FFQGHWHVPFNASETKEKDFHVDSTTIVKKPTM-SLLQPLFYTENKELEAQLVELPYKES 565
+F+ +W F T +++F + + + S Y+EN + Q++ LPYK++
Sbjct: 172 YFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLSLPYKDT 229
Query: 566 GF 571
F
Sbjct: 230 SF 231
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 71.7 bits (168), Expect = 4e-13
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
Frame = +2
Query: 41 RGLQRAEIDKFLGNGDYSGVANPY---ISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKF 211
+G R EI K L NG + IS +E + +AN I+ +T+ + +
Sbjct: 53 KGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGTEV-NVANHIFSRKTFTIKKLY 111
Query: 212 TITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPISDDTIDPNAAAALFNVI 388
V++ Y + ++F D + +A+ IN + +E T+GHIK I+ D+I A L N
Sbjct: 112 LNDVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAF 171
Query: 389 FFQGHWHVPFNASETKEKDFHVDSTTIVKKPTM-SLLQPLFYTENKELEAQLVELPYKES 565
+F+ +W F T +++F + + + S Y+EN + Q++ LPYK++
Sbjct: 172 YFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLSLPYKDT 229
Query: 566 GF 571
F
Sbjct: 230 SF 231
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+AN ++ + + + + V++ Y + ++DF + + A+ IN + E T HIK I
Sbjct: 86 LANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKII 145
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF--HVDSTTIVKKPTMSLLQPLFY 511
D+I+ + A L N ++F+ W F T + +F DS + S + Y
Sbjct: 146 GSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS-RDY 204
Query: 512 TENKELEAQLVELPYKESGF 571
EN + Q++ LPYK++ F
Sbjct: 205 AENDQF--QVLSLPYKDNTF 222
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+AN ++ + + + + V++ Y + ++DF + + A+ IN + E T HIK I
Sbjct: 86 LANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKII 145
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF--HVDSTTIVKKPTMSLLQPLFY 511
D+I+ + A L N ++F+ W F T + +F DS + S + Y
Sbjct: 146 GSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS-RDY 204
Query: 512 TENKELEAQLVELPYKESGF 571
EN + Q++ LPYK++ F
Sbjct: 205 AENDQF--QVLSLPYKDNTF 222
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+AN ++ + + + + V++ Y + ++DF + + A+ IN + E T HIK I
Sbjct: 86 LANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKII 145
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF--HVDSTTIVKKPTMSLLQPLFY 511
D+I+ + A L N ++F+ W F T + +F DS + S + Y
Sbjct: 146 GSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS-RDY 204
Query: 512 TENKELEAQLVELPYKESGF 571
EN + Q++ LPYK++ F
Sbjct: 205 AENDQF--QVLSLPYKDNTF 222
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+AN ++ + + + + V++ Y + ++DF + + A+ IN + E T HIK I
Sbjct: 86 LANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKII 145
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF--HVDSTTIVKKPTMSLLQPLFY 511
D+I+ + A L N ++F+ W F T + +F DS + S + Y
Sbjct: 146 GSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS-RDY 204
Query: 512 TENKELEAQLVELPYKESGF 571
EN + Q++ LPYK++ F
Sbjct: 205 AENDQF--QVLSLPYKDNTF 222
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+AN ++ + + + + V++ Y + ++DF + + A+ IN + E T HIK I
Sbjct: 86 LANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKII 145
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF--HVDSTTIVKKPTMSLLQPLFY 511
D+I+ + A L N ++F+ W F T + +F DS + S + Y
Sbjct: 146 GSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS-RDY 204
Query: 512 TENKELEAQLVELPYKESGF 571
EN + Q++ LPYK++ F
Sbjct: 205 AENDQF--QVLSLPYKDNTF 222
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 61.7 bits (143), Expect = 4e-10
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+AN ++ + + + + V++ Y + ++DF + + A+ IN + E T HIK I
Sbjct: 86 LANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKII 145
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF--HVDSTTIVKKPTMSLLQPLFY 511
D+I+ + A L N ++F+ W F T + +F DS + S + Y
Sbjct: 146 GSDSINSDLVAVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLHASSVS-RDY 204
Query: 512 TENKELEAQLVELPYKESGF 571
EN + Q++ LPYK++ F
Sbjct: 205 AENDQF--QVLSLPYKDNTF 222
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+ANK+Y+ +T++ F T ++ Y ++ +++D + T A IN + N T G IK+
Sbjct: 85 LANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIA 143
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 448
+ D+I +A A L N I+F+ W F+ E+DF
Sbjct: 144 TQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDF 179
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 57.6 bits (133), Expect = 6e-09
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +2
Query: 161 MANKIYVGNKYTLDEKFTIT-VRQYQSEVETIDFSDTKKAADIINQWANEKTRGHIKSPI 337
+ANK+Y+ +T++ F T ++ Y ++ +++D + T A IN + N T G IK+
Sbjct: 85 LANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQEINSFVNTATNGKIKNIA 143
Query: 338 SDDTIDPNAAAALFNVIFFQGHWHVPFNASETKEKDF 448
+ D+I +A A L N I+F+ W F+ E+DF
Sbjct: 144 TQDSIK-DAIALLINSIYFKADWDDKFDGMSVSEQDF 179
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 363 QLPRSSMLYSSRVTGT----CLSTQVKLKRKISMLTLQ 464
QL +S Y + VT T CL T ++LKR+ S LQ
Sbjct: 243 QLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQ 280
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 363 QLPRSSMLYSSRVTGT----CLSTQVKLKRKISMLTLQ 464
QL +S Y + VT T CL T ++LKR+ S LQ
Sbjct: 243 QLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQ 280
>AJ505020-1|CAD43602.1| 382|Caenorhabditis elegans
alpha-1->3-fucosyltransferase homologueprotein.
Length = 382
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -3
Query: 489 LMVGFFTMVVESTWKSFSLVS-----LALKGTCQ*--PWKNITLKSAAAAFGSMVSSEIG 331
++ G + +V+ + W+ F L L G + P KN+T+ A +G + +E+
Sbjct: 13 VIFGVYAVVILTFWQFFYSADFLSKFLQLSGPSEFSVPRKNVTIYVATTYYGDPIDAEMA 72
Query: 330 DLICPRV 310
L CP +
Sbjct: 73 FLTCPEL 79
>AC006674-5|AAF39933.2| 382|Caenorhabditis elegans Fucosyl
transferase protein 4 protein.
Length = 382
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = -3
Query: 489 LMVGFFTMVVESTWKSFSLVS-----LALKGTCQ*--PWKNITLKSAAAAFGSMVSSEIG 331
++ G + +V+ + W+ F L L G + P KN+T+ A +G + +E+
Sbjct: 13 VIFGVYAVVILTFWQFFYSADFLSKFLQLSGPSEFSVPRKNVTIYVATTYYGDPIDAEMA 72
Query: 330 DLICPRV 310
L CP +
Sbjct: 73 FLTCPEL 79
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = +2
Query: 41 RGLQRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTIT 220
RG+ E K SGVA S F E N +M + KY DEK +
Sbjct: 1949 RGIAEFERSKQEKEVQRSGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEKLSTP 2005
Query: 221 VRQYQSEVET 250
R + EV T
Sbjct: 2006 ERTVEPEVST 2015
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = +2
Query: 41 RGLQRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEKFTIT 220
RG+ E K SGVA S F E N +M + KY DEK +
Sbjct: 1949 RGIAEFERSKQEKEVQRSGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEKLSTP 2005
Query: 221 VRQYQSEVET 250
R + EV T
Sbjct: 2006 ERTVEPEVST 2015
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 256
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 256
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 256
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 256
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,883,099
Number of Sequences: 27780
Number of extensions: 285131
Number of successful extensions: 805
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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