Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_A23
         (209 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical p...    26   4.2  
Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha...    26   4.2  
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha...    26   4.2  
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    26   4.2  
U97006-3|AAC47966.1|  470|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z82052-5|CAB04828.1|  382|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    25   9.7  

>AC006696-8|AAF39989.1|  120|Caenorhabditis elegans Hypothetical
           protein W08E12.2 protein.
          Length = 120

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 195 SP*AAYVLEIL*YSSCCHSSRGLCFGY 115
           +P  +Y      YSSCC+S+   C GY
Sbjct: 76  APRCSYCPNNFGYSSCCNSNNFSCCGY 102


>Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical
           protein F35E12.10 protein.
          Length = 487

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +3

Query: 108 SPSSQSKVLCYYDSKSYIRESQARMLPTDL 197
           SP+ + + L  YD+++Y      +++PT++
Sbjct: 306 SPTHKKETLIQYDAQTYTSSQMPQVIPTNM 335


>Z35719-2|CAA84799.2|  715|Caenorhabditis elegans Hypothetical
           protein F17C8.3 protein.
          Length = 715

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 96  NHPASPSSQSKVLCYYDSKSYIRESQARMLPTDL 197
           N+PA P + +  L YY   S I+ES+ + +   L
Sbjct: 681 NNPAKPGAVTGQLTYYSFLSSIKESRYKPIGVQL 714


>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase
           2 protein.
          Length = 1668

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 61  SPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKH 177
           S G+W   + LP  Q HLVA    S T+ + A  +N  H
Sbjct: 286 SSGFWALPMFLPNLQKHLVA-IPVSLTLISLAWWQNFVH 323


>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
           protein 2 protein.
          Length = 1668

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 61  SPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISENLKH 177
           S G+W   + LP  Q HLVA    S T+ + A  +N  H
Sbjct: 286 SSGFWALPMFLPNLQKHLVA-IPVSLTLISLAWWQNFVH 323


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 49  PWSPSPGYWR*RLRLPTTQHHLVAKAKSSATMTARAISEN 168
           P+SP P + R  LR P T    V   KS++  +  + +EN
Sbjct: 18  PFSPIPKFSR--LRTPRTSREYVCPLKSTSPQSPSSSTEN 55


>U97006-3|AAC47966.1|  470|Caenorhabditis elegans Hypothetical
           protein C13F10.6 protein.
          Length = 470

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 88  RLPTTQHHLVAKAKSSATMTARAISENLKHVCC 186
           R+ + + HL  +  +      R I+ NLKH CC
Sbjct: 157 RIESLELHLDRQWCTEIERMKRLINPNLKHFCC 189


>Z82052-5|CAB04828.1|  382|Caenorhabditis elegans Hypothetical
           protein T25E12.10 protein.
          Length = 382

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 108 SPSSQSKVLCYYDSKSYIRESQARMLPTD 194
           SP++ S +L +YD++S +  + AR  P D
Sbjct: 332 SPTTYSNLLYFYDTRSCVLMTVARGGPYD 360


>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 135 CYYDSKSYIRESQARMLPTDLEPAL 209
           CY+ + +  R+ +A+ +P D  P L
Sbjct: 57  CYFTNWAQYRQGRAKFVPEDYTPGL 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,877,322
Number of Sequences: 27780
Number of extensions: 48703
Number of successful extensions: 134
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)