Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_A19
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 27 3.1
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 27 3.1
AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical... 27 4.1
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 27 4.1
AF016417-6|AAB65283.2| 313|Caenorhabditis elegans Hypothetical ... 27 5.4
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 5.4
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 5.4
Z81483-1|CAB03963.1| 307|Caenorhabditis elegans Hypothetical pr... 26 7.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 26 7.2
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 7.2
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 26 9.5
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 26 9.5
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 26 9.5
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 26 9.5
AF016425-10|AAB65334.2| 336|Caenorhabditis elegans Serpentine r... 26 9.5
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 9.5
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 26 9.5
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 26 9.5
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 151 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 267
V A P P F+ P+ P PI GPAF P P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 151 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 267
V A P P F+ P+ P P+ GPAF P P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 88 VDHNPDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGN 207
+D + DY+ G +P D +S+ +V+ D + +Q N N
Sbjct: 3106 LDSDSDYSEGTLPPDSSSEEIVVG--DVYSTQEPNNICAN 3143
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 88 VDHNPDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGN 207
+D + DY+ G +P D +S+ +V+ D + +Q N N
Sbjct: 3106 LDSDSDYSEGTLPPDSSSEEIVVG--DVYSTQEPNNICAN 3143
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 88 VDHNPDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGN 207
+D + DY+ G +P D +S+ +V+ D + +Q N N
Sbjct: 656 LDSDSDYSEGTLPPDSSSEEIVVG--DVYSTQEPNNICAN 693
>AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical
protein Y60A3A.25 protein.
Length = 421
Score = 27.1 bits (57), Expect = 4.1
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +1
Query: 73 NRVHVVDHNPDYNPGQVPSDGNSDHVVIANPDPFFSQP-SNGPSG---NYEPISTGPAFV 240
+R+H D P Q D N V N D F QP +N P+ N + TGP V
Sbjct: 97 DRIHQNFQTMDMQPYQEYQDNNESGWVDLNNDNQFQQPDNNDPNANDLNLWNMETGPGQV 156
Query: 241 DFNHPNYP 264
F P P
Sbjct: 157 -FEAPVLP 163
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 97 NPDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 234
NP PG +G SD P P P NGP+G +P GP+
Sbjct: 939 NPGPGPGPPSPNGPSDP---NKPSPNGPSP-NGPNGPSDPNKPGPS 980
>AF016417-6|AAB65283.2| 313|Caenorhabditis elegans Hypothetical
protein F17A9.6 protein.
Length = 313
Score = 26.6 bits (56), Expect = 5.4
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 32 SCFSSSPYWPWLPQTECTWSIITLIIIQARFH-RTAIV 142
SCF++SPY P Q C+ S+ +++ H +T IV
Sbjct: 5 SCFTNSPYTPNYTQYGCSNSVPVEHLVELTSHFQTPIV 42
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 163 PDPFFSQPSNGPSGNYEPIS 222
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 163 PDPFFSQPSNGPSGNYEPIS 222
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>Z81483-1|CAB03963.1| 307|Caenorhabditis elegans Hypothetical
protein C43D7.2 protein.
Length = 307
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = -1
Query: 186 WLREEXXXXXXXXXVTIAVRWNLAWIIIRVMIDHVHSV 73
W++ E ++WN + +R +IDH+ SV
Sbjct: 54 WIKFEEFVSIDLRRSKSLIKWNPLEVELRKLIDHIKSV 91
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 166 DPFFSQPSNGPSGNYEPISTGPA 234
DP +QPS GP G + P P+
Sbjct: 306 DPSGAQPSGGPPGPFNPSGAPPS 328
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 133 GNSDHVVIANPDPFFSQPSNGPSG 204
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 210
PD NP +V + G S +I P + NG +Y
Sbjct: 568 PDKNPDEVAAKGTSPENIIVQWKPMSREEWNGADFHY 604
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 210
PD NP +V + G S +I P + NG +Y
Sbjct: 568 PDKNPDEVAAKGTSPENIIVQWKPMSREEWNGADFHY 604
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 210
PD NP +V + G S +I P + NG +Y
Sbjct: 752 PDKNPDEVAAKGTSPENIIVQWKPMSREEWNGADFHY 788
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 210
PD NP +V + G S +I P + NG +Y
Sbjct: 752 PDKNPDEVAAKGTSPENIIVQWKPMSREEWNGADFHY 788
>AF016425-10|AAB65334.2| 336|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 13 protein.
Length = 336
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -1
Query: 327 SLISMRHLLPTTGERVVVSLGWIIGMIEIDERRS 226
++I M H +P G V +++ W + I+ ++RR+
Sbjct: 279 AIIEMTHAIPLYGMIVCIAVYWKLRTIDGEQRRN 312
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 133 GNSDHVVIANPDPFFSQPSNGPSG 204
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 210
PD NP +V + G S +I P + NG +Y
Sbjct: 568 PDKNPDEVAAKGTSPENIIVQWKPMSREEWNGADFHY 604
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 PDYNPGQVPSDGNSDHVVIANPDPFFSQPSNGPSGNY 210
PD NP +V + G S +I P + NG +Y
Sbjct: 752 PDKNPDEVAAKGTSPENIIVQWKPMSREEWNGADFHY 788
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,010,698
Number of Sequences: 27780
Number of extensions: 164443
Number of successful extensions: 491
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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