Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_A16
         (137 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   1.3  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    20   3.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   5.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   5.4  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    18   9.5  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 62  KVVKNKQYFKRYQVKFKRRREGKTD 136
           K  KN+  +++Y+   K R   KT+
Sbjct: 286 KSYKNENSYRKYRETSKERSRDKTE 310


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 68  LLSRIPFSKIF 36
           + +R+PF KIF
Sbjct: 240 IFNRVPFDKIF 250


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +1

Query: 4   LWALCGYFYFRN 39
           L+ +C YF+F +
Sbjct: 162 LYEMCPYFFFNS 173


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +1

Query: 4   LWALCGYFYFRN 39
           L+ +C YF+F +
Sbjct: 162 LYEMCPYFFFNS 173


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 68  VKNKQYFKRYQVKFKRRR 121
           V NK+  K+ + K+K R+
Sbjct: 136 VLNKKRSKKAEAKYKARQ 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,916
Number of Sequences: 438
Number of extensions: 336
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 26
effective length of database: 134,955
effective search space used:  2564145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)