Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_A10
         (491 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.4  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.4  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.4  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 403 VIHVKKISCLGFHHKNLNIHR 465
           ++    ++CL FHH++  + R
Sbjct: 527 IVATMAVACLLFHHRDTPVVR 547


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 403 VIHVKKISCLGFHHKNLNIHR 465
           ++    ++CL FHH++  + R
Sbjct: 617 IVATMAVACLLFHHRDTPVVR 637


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 FYLRSLLVYWFRGDKLNL 153
           +Y+R +L YW    + ++
Sbjct: 235 YYMREMLPYWMSSSQYHM 252


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 5/18 (27%), Positives = 11/18 (61%)
 Frame = +1

Query: 100 FYLRSLLVYWFRGDKLNL 153
           +Y+R +L YW    + ++
Sbjct: 235 YYMREMLPYWMSSSQYHM 252


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 66  TLAFIVLYIFSFLFEV 113
           TLA  VL++ SFLF +
Sbjct: 9   TLAVNVLFVNSFLFVI 24


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 66  TLAFIVLYIFSFLFEV 113
           TLA  VL++ SFLF +
Sbjct: 9   TLAVNVLFVNSFLFVI 24


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 66  TLAFIVLYIFSFLFEV 113
           TLA  VL++ SFLF +
Sbjct: 9   TLAVNVLFVNSFLFVI 24


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,759
Number of Sequences: 438
Number of extensions: 1934
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)