Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_A09
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056149-1|BAB71104.1|  449|Homo sapiens protein ( Homo sapiens ...    73   5e-13
BC005121-1|AAH05121.1|  352|Homo sapiens C7orf26 protein protein.      44   3e-04
BC001076-1|AAH01076.1|  352|Homo sapiens C7orf26 protein protein.      44   3e-04

>AK056149-1|BAB71104.1|  449|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31587 fis, clone NT2RI2002243. ).
          Length = 449

 Score = 73.3 bits (172), Expect = 5e-13
 Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +3

Query: 3   LQLVENIIRDHFYLNTSNQISLRCLANTAPQFVSNFITAVTELYMHDVTVVKM-PPKNLL 179
           ++L + ++ D+  L   +  +L+ + + +P+F   FIT+VT LY  D++   + PP +LL
Sbjct: 146 VRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQFITSVTALY--DLSSDDLIPPMDLL 203

Query: 180 EVITSWVYSNPTLCMSAQLNPAALPSGSIPMAAVTPLAGLVRWCALAPLCIEENKE 347
           E+I +W++ +P L +   LN     +  I    +TPL GL+RWC  APL  +  K+
Sbjct: 204 EMIVTWIFEDPRLILITFLNTPIAANLPIGFLELTPLVGLIRWCVKAPLAYKRKKK 259


>BC005121-1|AAH05121.1|  352|Homo sapiens C7orf26 protein protein.
          Length = 352

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   LQLVENIIRDHFYLNTSNQISLRCLANTAPQFVSNFITAVTELYMHDVTVVKM-PPKNLL 179
           ++L + ++ D+  L   +  +L+ + + +P+F   FIT+VT LY  D++   + PP +LL
Sbjct: 127 VRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQFITSVTALY--DLSSDDLIPPMDLL 184

Query: 180 EVITSWVYSNPTL 218
           E+I +W++ +P++
Sbjct: 185 EMIVTWIFEDPSV 197


>BC001076-1|AAH01076.1|  352|Homo sapiens C7orf26 protein protein.
          Length = 352

 Score = 44.4 bits (100), Expect = 3e-04
 Identities = 22/73 (30%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   LQLVENIIRDHFYLNTSNQISLRCLANTAPQFVSNFITAVTELYMHDVTVVKM-PPKNLL 179
           ++L + ++ D+  L   +  +L+ + + +P+F   FIT+VT LY  D++   + PP +LL
Sbjct: 127 VRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQFITSVTALY--DLSSDDLIPPMDLL 184

Query: 180 EVITSWVYSNPTL 218
           E+I +W++ +P++
Sbjct: 185 EMIVTWIFEDPSV 197


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,747,249
Number of Sequences: 237096
Number of extensions: 1769791
Number of successful extensions: 3663
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3660
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)