Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P24
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.56 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   3.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   3.9  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    21   6.8  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    21   6.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +1

Query: 475  NIPVNSFMQTXEPHLSDLLTIAIPCNTKSFTLHRVSCG 588
            N P++ +    +P   D  T  I    + +TL  + CG
Sbjct: 1393 NAPIHGYTIHYKPEFGDWDTAQISSTVQKYTLENLLCG 1430


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 474 DI*SFSNWLMILSRVQNNQQPWFAE 400
           +I  F +++  L+   N + PWF+E
Sbjct: 259 NIPGFDDYMASLTPDTNRRNPWFSE 283


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -2

Query: 474 DI*SFSNWLMILSRVQNNQQPWFAE 400
           +I  F +++  L+   N + PWF+E
Sbjct: 349 NIPGFDDYMASLTPDTNRRNPWFSE 373


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 576 PMECERLSVAWDSNGQ 529
           P + ERLS  +DS G+
Sbjct: 95  PKDWERLSAKYDSTGE 110


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 576 PMECERLSVAWDSNGQ 529
           P + ERLS  +DS G+
Sbjct: 95  PKDWERLSAKYDSTGE 110


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 66 SSRHRCVCKSYD*TRIMP 13
          +S H C  K+ D T+IMP
Sbjct: 20 NSPHTCRTKNGDYTKIMP 37


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 159 LHLEINIFRSQMGGRRKHLSHI 94
           LHLE N  R   G   + LSH+
Sbjct: 847 LHLEDNRIRELKGFEFERLSHL 868


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,840
Number of Sequences: 438
Number of extensions: 3010
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)