Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_P22
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 307 3e-84
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 307 3e-84
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 305 9e-84
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 303 7e-83
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 303 7e-83
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 303 7e-83
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 247 3e-66
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 247 3e-66
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 244 2e-65
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 244 2e-65
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 5.0
U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 8.7
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 307 bits (754), Expect = 3e-84
Identities = 130/179 (72%), Positives = 145/179 (81%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1543 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1602
Query: 188 NDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
ND+SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1603 NDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1662
Query: 368 IGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI 544
IGYSF MHT L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI
Sbjct: 1663 IGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTI 1721
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 481
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 482 NGEGGTCHHFANKLSFWLTT 541
+ + N S+WL+T
Sbjct: 1592 DFNNVCNYASRNDKSYWLST 1611
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 307 bits (754), Expect = 3e-84
Identities = 130/179 (72%), Positives = 145/179 (81%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1544 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1603
Query: 188 NDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
ND+SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1604 NDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1663
Query: 368 IGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI 544
IGYSF MHT L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI
Sbjct: 1664 IGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTI 1722
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 481
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 482 NGEGGTCHHFANKLSFWLTT 541
+ + N S+WL+T
Sbjct: 1593 DFNNVCNYASRNDKSYWLST 1612
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 305 bits (750), Expect = 9e-84
Identities = 129/179 (72%), Positives = 145/179 (81%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 46 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 105
Query: 188 NDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 106 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 165
Query: 368 IGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI 544
IGYSF MHT L+SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI
Sbjct: 166 IGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTI 224
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 481
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 36 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 94
Query: 482 NGEGGTCHHFANKLSFWLTT 541
+ + N+ S+WL+T
Sbjct: 95 DFNNVCNYASRNEKSYWLST 114
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 303 bits (743), Expect = 7e-83
Identities = 128/179 (71%), Positives = 144/179 (80%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1544 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1603
Query: 188 NDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1604 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1663
Query: 368 IGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI 544
IGYSF MHT +SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI
Sbjct: 1664 IGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTI 1722
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 481
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1534 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1592
Query: 482 NGEGGTCHHFANKLSFWLTT 541
+ + N+ S+WL+T
Sbjct: 1593 DFNNVCNYASRNEKSYWLST 1612
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 303 bits (743), Expect = 7e-83
Identities = 128/179 (71%), Positives = 144/179 (80%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1543 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1602
Query: 188 NDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1603 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1662
Query: 368 IGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI 544
IGYSF MHT +SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI
Sbjct: 1663 IGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTI 1721
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 481
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1533 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1591
Query: 482 NGEGGTCHHFANKLSFWLTT 541
+ + N+ S+WL+T
Sbjct: 1592 DFNNVCNYASRNEKSYWLST 1611
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 303 bits (743), Expect = 7e-83
Identities = 128/179 (71%), Positives = 144/179 (80%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMPFLFCD N+VCNYASR
Sbjct: 1580 VPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFCDFNNVCNYASR 1639
Query: 188 NDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSELW 367
N++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQT+ IP CP GWS LW
Sbjct: 1640 NEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQTIQIPNCPAGWSSLW 1699
Query: 368 IGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTTI 544
IGYSF MHT +SPGSCLEDFRA PFIECNG G+CH+FANK SFWLTTI
Sbjct: 1700 IGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGARGSCHYFANKFSFWLTTI 1758
Score = 60.9 bits (141), Expect = 6e-10
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 302 VIAVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIEC 481
V+ HSQT ++P CP G ++LW GYS +++ L GSCL+ F +PF+ C
Sbjct: 1570 VLVKHSQTTEVPRCPEGQTKLWDGYS-LLYIEGNEKSHNQDLGHAGSCLQRFSTMPFLFC 1628
Query: 482 NGEGGTCHHFANKLSFWLTT 541
+ + N+ S+WL+T
Sbjct: 1629 DFNNVCNYASRNEKSYWLST 1648
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 247 bits (605), Expect = 3e-66
Identities = 107/181 (59%), Positives = 133/181 (73%), Gaps = 2/181 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 1290 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1349
Query: 188 NDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 1350 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1409
Query: 362 LWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTT 541
+W GYSFVMHT L SPGSCLE+FRA+PFIEC+G GTC+++A FWL+
Sbjct: 1410 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWLSI 1468
Query: 542 I 544
+
Sbjct: 1469 V 1469
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 487
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1282 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1339
Query: 488 EGGTCH-HFANKLSFWLTT 541
CH N SFWL+T
Sbjct: 1340 MNSVCHVSSRNDYSFWLST 1358
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 247 bits (605), Expect = 3e-66
Identities = 107/181 (59%), Positives = 133/181 (73%), Gaps = 2/181 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 1547 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1606
Query: 188 NDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 1607 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1666
Query: 362 LWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFWLTT 541
+W GYSFVMHT L SPGSCLE+FRA+PFIEC+G GTC+++A FWL+
Sbjct: 1667 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFWLSI 1725
Query: 542 I 544
+
Sbjct: 1726 V 1726
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 487
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1539 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1596
Query: 488 EGGTCH-HFANKLSFWLTT 541
CH N SFWL+T
Sbjct: 1597 MNSVCHVSSRNDYSFWLST 1615
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 244 bits (598), Expect = 2e-65
Identities = 106/177 (59%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 1546 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 1605
Query: 188 NDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 1606 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 1665
Query: 362 LWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFW 532
+W GYSFVMHT L SPGSCLE+FRA+PFIEC+G GTC+++A FW
Sbjct: 1666 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFW 1721
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 487
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 1538 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 1595
Query: 488 EGGTCH-HFANKLSFWLTT 541
CH N SFWL+T
Sbjct: 1596 MNSVCHVSSRNDYSFWLST 1614
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 244 bits (598), Expect = 2e-65
Identities = 106/177 (59%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 187
VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+FC++N VC+ +SR
Sbjct: 101 VPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCNMNSVCHVSSR 160
Query: 188 NDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQTLDIPGCPVGWSE 361
ND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ +P CP GWS
Sbjct: 161 NDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQDTSVPQCPQGWSG 220
Query: 362 LWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNGEGGTCHHFANKLSFW 532
+W GYSFVMHT L SPGSCLE+FRA+PFIEC+G GTC+++A FW
Sbjct: 221 MWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIECHGR-GTCNYYATNHGFW 276
Score = 67.3 bits (157), Expect = 7e-12
Identities = 34/79 (43%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 308 AVHSQTLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLEDFRAIPFIECNG 487
A HSQT +P CP G S+LW GYS +++ L PGSCL F +PF+ CN
Sbjct: 93 AKHSQTTAVPQCPPGASQLWEGYS-LLYVQGNGRASGQDLGQPGSCLSKFNTMPFMFCN- 150
Query: 488 EGGTCH-HFANKLSFWLTT 541
CH N SFWL+T
Sbjct: 151 MNSVCHVSSRNDYSFWLST 169
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 8 VPQCEPGHVKLWDGYSLLYIDGNEKAHN 91
V + GHVK+WDG S ++ ++AH+
Sbjct: 275 VTASKDGHVKIWDGVSNRCVETFKRAHD 302
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 89 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 220
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical
protein C52B9.4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 6.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +2
Query: 200 YWLSTG--QPIPMMPVEGNEIVKYISRCVVCEVPSNVIA-----VHSQTLDI-PGCPVGW 355
YW+ T I M+ ++ N+I + R + +VIA + S I P C V W
Sbjct: 368 YWIFTSLASTIRMLRLKRNDIKLNVYRHFANTLAFSVIASVIFMLWSMIYHIFPTCRVDW 427
Query: 356 SELWIGYSF 382
ELW+ +F
Sbjct: 428 KELWVDTAF 436
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 146 LFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEI--VKYISRCVVCEVPSNVIAVHS 319
LF L N + + +YW+ G+P+P ++ +K I E + IA H
Sbjct: 2350 LFPSLVQSFNISKIKNLAYWVVGGEPLPQSLLDSALALGIKVIQNYGPTETTAFAIAKHM 2409
Query: 320 QTLDIPGCPVG 352
+ D GC +G
Sbjct: 2410 KKGD-AGCQIG 2419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,070,008
Number of Sequences: 27780
Number of extensions: 272585
Number of successful extensions: 627
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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