Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P16
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    27   0.17 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    26   0.39 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   4.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   4.8  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   4.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 23/90 (25%), Positives = 44/90 (48%)
 Frame = +3

Query: 366 ALITGCNAGIGYETAKSLVRHGCTVLFANRNMEDTERAIQDIIKETDASEDLMKALHLT* 545
           AL+TG N+GIG    + LV  G  V+     ++     ++ +++E  +    +  L    
Sbjct: 10  ALVTGANSGIGKCLIECLVGKGMKVIGIAPQVD----KMKTLVEELKSKPGKLVPLQCDL 65

Query: 546 SSLSSVRKCALDIKMMLSGHLDMLILNAGV 635
           S+ + + K    ++  L G +D+LI NA +
Sbjct: 66  SNQNDILKVIEWVEKNL-GAIDILINNATI 94


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 17/64 (26%), Positives = 27/64 (42%)
 Frame = -2

Query: 251 WINICFIAGTALHIHSFTILISRYGPSKW*LFRNYFFSTSLGMGPLYFICTGVDEVYVSI 72
           W+    I+   L I       S  GPS   + +N+F+     +G  Y     + +VY  I
Sbjct: 166 WLGAACISLPPLLIMGNEHTYSETGPSHCVVCQNFFYQIYATLGSFYIPLFVMIQVYYKI 225

Query: 71  FGAS 60
           F A+
Sbjct: 226 FCAA 229


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 222 RTGNKTYIDPRLAFAKEEKK 281
           + G +TY++  LA AKE  K
Sbjct: 348 KVGVRTYLESELAKAKERPK 367


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 222 RTGNKTYIDPRLAFAKEEKK 281
           + G +TY++  LA AKE  K
Sbjct: 263 KVGVRTYLESELAKAKERPK 282


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 222 RTGNKTYIDPRLAFAKEEKK 281
           + G +TY++  LA AKE  K
Sbjct: 582 KVGVRTYLESELAKAKERPK 601


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 189 DENGKTMYVQSRTGNKTYIDPRLAFAKEEKKHV 287
           DE+   +Y Q +TG+  Y  P       E K++
Sbjct: 114 DEDQHRLYAQIKTGSYDYPSPEWDTVTPEAKNL 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,731
Number of Sequences: 438
Number of extensions: 5021
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)