Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P14
         (443 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical ...    32   0.22 
Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z81049-4|CAJ76935.1|  496|Caenorhabditis elegans Hypothetical pr...    28   2.7  
Z81049-3|CAB02846.2|  631|Caenorhabditis elegans Hypothetical pr...    28   2.7  
U67949-5|AAB07566.1|  705|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of a...    27   4.6  
AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.      27   4.6  
Z81509-4|CAB04152.2|  236|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AC090999-1|AAK26146.1|  390|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.8 protein.
          Length = 390

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 11/23 (47%), Positives = 18/23 (78%)
 Frame = +3

Query: 171 LIFWSMKEDPDFLMQIDGATDES 239
           +I+WS  +DPD+L Q++  TD+S
Sbjct: 258 IIYWSRPDDPDYLSQMEYITDKS 280


>Z66512-7|CAA91321.1|  730|Caenorhabditis elegans Hypothetical
           protein F52H3.1 protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 316 SSCVKPKFFRLTAHRTDLFNADPFV-SDSSVAPSICIKKSGSSFM 185
           S+ +  KFF   + +  LF A+PF   D S+AP   I + G  F+
Sbjct: 108 STTILRKFFEHYSEKRLLFGAEPFCWPDQSLAPEYPIVEFGKRFL 152


>U23515-13|AAK21453.1|  823|Caenorhabditis elegans Hypothetical
           protein R144.2a protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 102 MDDLASKIIVETGRPSDRFHLGKLIFWSMKEDPDFLMQIDGATDESETNGSA 257
           +D L SK +V+ G PS   ++G   F      P  +  I+G   E    GSA
Sbjct: 467 IDILGSKHMVKFGAPSRELYIGGHPFKGQFGGPPIIATINGRRHEIRLTGSA 518


>Z81049-4|CAJ76935.1|  496|Caenorhabditis elegans Hypothetical
           protein C48D1.1b protein.
          Length = 496

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 237 IHLSLHQSALKNLDLPSCSKILVFLNETY 151
           I +S+ +  L+NL++PSC K +V   +T+
Sbjct: 195 IRISISEDNLQNLNIPSCIKTIVKSMQTF 223


>Z81049-3|CAB02846.2|  631|Caenorhabditis elegans Hypothetical
           protein C48D1.1a protein.
          Length = 631

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 237 IHLSLHQSALKNLDLPSCSKILVFLNETY 151
           I +S+ +  L+NL++PSC K +V   +T+
Sbjct: 330 IRISISEDNLQNLNIPSCIKTIVKSMQTF 358


>U67949-5|AAB07566.1|  705|Caenorhabditis elegans Hypothetical
           protein F55A4.5 protein.
          Length = 705

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +3

Query: 51  HKQKKMFNHAHNSVHWFMDDLASKIIVETGRPSDRFHLGKLIF 179
           HKQK + +  H   +    ++  +++ E G P DR ++ +  F
Sbjct: 288 HKQKSVISDIHEKAYQLKVNVVFEVLKEEGPPHDRQYVVRCAF 330


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 48  KHKQKKMFNHAHNSVHWFMDDL 113
           KH   K +NH+HN+ H  +DDL
Sbjct: 558 KHAYSKKYNHSHNA-HKSLDDL 578


>U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 5 protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 273 RCAVSLKNFGLTQDDVIVLLGPNDINLAIPLYAGLFLGA 389
           R A SL+N+G+   D +    PN  +  + ++A   +GA
Sbjct: 168 RIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVGA 206


>AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.
          Length = 700

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 273 RCAVSLKNFGLTQDDVIVLLGPNDINLAIPLYAGLFLGA 389
           R A SL+N+G+   D +    PN  +  + ++A   +GA
Sbjct: 168 RIATSLRNYGIGPGDTVCGFVPNTYDTLVAVFATAAVGA 206


>Z81509-4|CAB04152.2|  236|Caenorhabditis elegans Hypothetical
           protein F21A3.6 protein.
          Length = 236

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +3

Query: 42  KLKHKQKKMFNHAHNSVHWFMDDLASKIIVETGRPSDR 155
           K+  K K   +   N+V   +D LA KII ET R SDR
Sbjct: 53  KVAEKPKTTSSEKENAVP--VDPLARKIIDETSRLSDR 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,135,150
Number of Sequences: 27780
Number of extensions: 206647
Number of successful extensions: 532
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)