Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P14
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          24   0.65 
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    24   0.65 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   1.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.1  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   4.6  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   6.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   6.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   6.1  

>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 367 YKGIARFISLGPNKTMTS 314
           YKGI  F  L PN+T+ S
Sbjct: 74  YKGIVYFELLSPNRTINS 91


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 238 DSSVAPSICIKKSGSSFMLQN 176
           DS+  P +  KK+GS  +LQN
Sbjct: 322 DSTYIPKVKNKKAGSKHLLQN 342


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 367 YKGIARFISLGPNKTMTS 314
           YKGI  F  L PN+T+ S
Sbjct: 196 YKGIVYFELLPPNRTINS 213


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/40 (25%), Positives = 16/40 (40%)
 Frame = -2

Query: 310 CVKPKFFRLTAHRTDLFNADPFVSDSSVAPSICIKKSGSS 191
           C K K +   +  TD+ N+          P   + KSG +
Sbjct: 783 CEKGKEYYAASFHTDIGNSQSLAHQDQCCPGFTMTKSGKT 822


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 367 YKGIARFISLGPNKTMTS 314
           +KGI  F  L PN+T+ S
Sbjct: 75  HKGIVYFELLPPNRTINS 92


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 273 RCAVSLKNFGLTQDDVI 323
           RC +   +FG T+ DVI
Sbjct: 143 RCPLQFGSFGYTKRDVI 159


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 251 VCIEQISTMCS*PEEFWFNARRCHC 325
           V IEQ + +C    +++  +  CHC
Sbjct: 225 VVIEQPTFLCKGDGKWYLPSGGCHC 249


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 282 LHIVLICSMQTRSFQIHLSLHQSALKNLDL 193
           +HI+  C   T +    L   +++L NLD+
Sbjct: 19  VHILDTCGRDTYALNQSLHFVRASLSNLDM 48


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 282 LHIVLICSMQTRSFQIHLSLHQSALKNLDL 193
           +HI+  C   T +    L   +++L NLD+
Sbjct: 109 VHILDTCGRDTYALNQSLHFVRASLSNLDM 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,192
Number of Sequences: 438
Number of extensions: 2474
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)