Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P09
         (378 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA...    30   0.86 
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ...    28   3.5  
BT030410-1|ABO52830.1|  592|Drosophila melanogaster IP08946p pro...    27   8.0  
AY089292-1|AAL90030.1|  915|Drosophila melanogaster AT08673p pro...    27   8.0  
AE014297-2368|AAF55432.1|  277|Drosophila melanogaster CG5829-PA...    27   8.0  
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P...    27   8.0  

>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
            protein.
          Length = 1940

 Score = 30.3 bits (65), Expect = 0.86
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 58   ISGIDGLSGWP*PMGQKCASGEYGVYG 138
            I+G+ G +G+P P G K   GE GV G
Sbjct: 1113 INGLKGATGFPGPQGPKGPQGESGVVG 1139



 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +1

Query: 64  GIDGLSGWP*PMGQKCASGEYGVYGPVCTPG 156
           GIDG  G P   G   A G+ GV GP   PG
Sbjct: 120 GIDGCDGRPGMQGPSGAPGQNGVRGPPGKPG 150



 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 58   ISGIDGLSGWP*PMGQKCASGEYGVYGP 141
            ++G+DG +G P   GQK A G  G  GP
Sbjct: 1263 VAGLDGRAGRPGHFGQKGAPGPPGENGP 1290


>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
            alpha 2 protein.
          Length = 1761

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 58   ISGIDGLSGWP*PMGQKCASGEYGVYGP 141
            ++G+DG +G P   GQK A G  G  GP
Sbjct: 1261 VAGLDGRAGRPGHFGQKGAPGPPGENGP 1288



 Score = 27.9 bits (59), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 58   ISGIDGLSGWP*PMGQKCASGEYGVYG 138
            I+G+   +G+P P G K   GE GV G
Sbjct: 1111 INGLKAATGFPGPQGPKGPQGESGVVG 1137


>BT030410-1|ABO52830.1|  592|Drosophila melanogaster IP08946p
           protein.
          Length = 592

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 283 GSSIP*TRATRYTLENLSRSLASHIICLHHLLESIGNVN 167
           G ++P      +   +LS SL SH + LHH L + G+++
Sbjct: 78  GGAVPPAVLHHHLQHHLS-SLGSHPVALHHALHTFGHLH 115


>AY089292-1|AAL90030.1|  915|Drosophila melanogaster AT08673p
           protein.
          Length = 915

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 358 LHDDLSERKQ*PGSPNVTSCTPLNPGSSIP 269
           L  DLS  K+ P +PN  + TPL P S+ P
Sbjct: 145 LPTDLSNNKRRPLTPNPQAQTPLAPPSAPP 174


>AE014297-2368|AAF55432.1|  277|Drosophila melanogaster CG5829-PA
           protein.
          Length = 277

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 283 GSSIP*TRATRYTLENLSRSLASHIICLHHLLESIGNVN 167
           G ++P      +   +LS SL SH + LHH L + G+++
Sbjct: 78  GGAVPPAVLHHHLQHHLS-SLGSHPVALHHALHTFGHLH 115


>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
           protein.
          Length = 1290

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 358 LHDDLSERKQ*PGSPNVTSCTPLNPGSSIP 269
           L  DLS  K+ P +PN  + TPL P S+ P
Sbjct: 520 LPTDLSNNKRRPLTPNPQAQTPLAPPSAPP 549


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,725,531
Number of Sequences: 53049
Number of extensions: 368169
Number of successful extensions: 915
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)