Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P09
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          25   0.22 
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      25   0.22 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    24   0.52 
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   4.8  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   4.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 77  FPAGHDLWVKNAHLVNMVFMDLFV 148
           FP    +W  N  + NM F D+F+
Sbjct: 652 FPLDRPMWAWNFTIPNMYFKDVFI 675


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 25.4 bits (53), Expect = 0.22
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 77  FPAGHDLWVKNAHLVNMVFMDLFV 148
           FP    +W  N  + NM F D+F+
Sbjct: 652 FPLDRPMWAWNFTIPNMYFKDVFI 675


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -2

Query: 212 HHLPTSPIRVHWKRQSMVEPGVQTGP*TPYSPD 114
           HH    P      RQ ++E G    P  PYSPD
Sbjct: 243 HHDNARPHTSLVTRQKLLELGWDVLPHPPYSPD 275


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/25 (28%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 215 SHHLPTSPIRVHWKRQSM-VEPGVQ 144
           SH L   P++  W+R+++ +  G++
Sbjct: 176 SHALLKDPVKEFWERRTLQISDGIE 200


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/25 (28%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 215 SHHLPTSPIRVHWKRQSM-VEPGVQ 144
           SH L   P++  W+R+++ +  G++
Sbjct: 229 SHALLKDPVKEFWERRTLQISDGIE 253


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -3

Query: 304 SCTPLNPGSSIP*TRATRYTLENL-SRSLASHIICLHHLLESIGN 173
           +C P+ P   +    A  YTL+ L ++ +   +    H+L+   N
Sbjct: 133 TCGPVMPQGGVQALEAMLYTLDKLNTQDIVPGVRIGAHILDDCDN 177


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/31 (22%), Positives = 20/31 (64%)
 Frame = +2

Query: 92  DLWVKNAHLVNMVFMDLFVPLVQPSIDVSNG 184
           D+  ++  ++++   ++ VP  + +ID++NG
Sbjct: 353 DVKCEDERVISIPDKEITVPSNEETIDINNG 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,796
Number of Sequences: 438
Number of extensions: 2219
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)