Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P08
         (434 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125484-1|BAC86178.1|  148|Homo sapiens protein ( Homo sapiens ...    32   0.74 
AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens ...    29   5.2  
BC028203-1|AAH28203.2|  545|Homo sapiens mesoderm induction earl...    29   6.9  

>AK125484-1|BAC86178.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43495 fis, clone PEBLM2000338. ).
          Length = 148

 Score = 32.3 bits (70), Expect = 0.74
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +1

Query: 259 FSCIFSCLYNHHLVYPIYI*FWIHIFIPL*NVSLK*TRICTIYVCSNKVICV 414
           + CI+ C+Y H  VY  YI  ++++ +   +V +    +C +Y+     +CV
Sbjct: 10  YRCIYVCIYIHVFVYVCYIYLYVYVCVIYIHVCV---CVCVLYIHVCVYVCV 58


>AK128416-1|BAC87430.1|  303|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46559 fis, clone THYMU3040126. ).
          Length = 303

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 10/39 (25%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 226 LWLKENNHSLTFSCIFSCLYNHHLVYP-IYI*FWIHIFI 339
           +++  + +  T++C++ C+Y+H  ++  +Y+   IHI I
Sbjct: 17  IYVYTHTYIYTYTCMYVCIYSHTYIHTHVYVCVHIHICI 55


>BC028203-1|AAH28203.2|  545|Homo sapiens mesoderm induction early
           response 1, family member 2 protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -2

Query: 70  LVKFMFNINESLKKIRYNMNII 5
           LVK  FN+ E+L+++R+N+ +I
Sbjct: 274 LVKCNFNVEEALRRLRFNVKVI 295


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,298,420
Number of Sequences: 237096
Number of extensions: 1277756
Number of successful extensions: 9986
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9986
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)