Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P08
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   0.85 
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   2.0  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   3.4  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    22   3.4  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    22   3.4  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    22   3.4  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   3.4  

>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 61  FMFNINESLKKIRYNMNII 5
           + +N N + KK+ YN+N I
Sbjct: 96  YKYNYNNNCKKLYYNINYI 114


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 64  KFMFNINESLKKIRYNMNII 5
           K+ +N N   KK+ YN+N I
Sbjct: 96  KYNYNNNNYNKKLYYNINYI 115


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 64  KFMFNINESLKKIRYNMNII 5
           K+ +N N   KK+ YN+N I
Sbjct: 96  KYNYNNNNYNKKLYYNINYI 115


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 64  KFMFNINESLKKIRYNMNII 5
           K+ +N N   KK+ YN+N I
Sbjct: 96  KYNYNNNNYNKKLYYNINYI 115


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 64  KFMFNINESLKKIRYNMNII 5
           K+ +N N   KK+ YN+N I
Sbjct: 96  KYNYNNNNYNKKLYYNINYI 115


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 52  NINESLKKIRYNMNII 5
           N N + KK+ YN+N I
Sbjct: 104 NYNNNCKKLYYNINYI 119


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 52  NINESLKKIRYNMNII 5
           N N + KK+ YN+N I
Sbjct: 104 NYNNNCKKLYYNINYI 119


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 52  NINESLKKIRYNMNII 5
           N N + KK+ YN+N I
Sbjct: 104 NYNNNCKKLYYNINYI 119


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 52  NINESLKKIRYNMNII 5
           N N + KK+ YN+N I
Sbjct: 104 NYNNNCKKLYYNINYI 119


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 52  NINESLKKIRYNMNII 5
           N N + KK+ YN+N I
Sbjct: 343 NYNNNYKKLYYNINYI 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,999
Number of Sequences: 438
Number of extensions: 2578
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)