Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_P06
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transfer... 32 1.1
L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transfer... 32 1.4
BC125230-1|AAI25231.1| 1462|Homo sapiens CAMSAP1L1 protein protein. 32 1.4
BC125229-1|AAI25230.1| 1489|Homo sapiens CAMSAP1L1 protein protein. 32 1.4
BC056910-1|AAH56910.1| 678|Homo sapiens CAMSAP1L1 protein protein. 32 1.4
BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CA... 32 1.4
AL450104-2|CAI17077.1| 1489|Homo sapiens calmodulin regulated sp... 32 1.4
AL450104-1|CAI17076.1| 818|Homo sapiens calmodulin regulated sp... 32 1.4
AB029001-1|BAA83030.2| 1365|Homo sapiens KIAA1078 protein protein. 32 1.4
BC008151-1|AAH08151.1| 265|Homo sapiens glycoprotein M6B protein. 31 2.4
AF047197-1|AAD13718.1| 265|Homo sapiens M6ba protein. 31 2.4
AF037347-1|AAC19166.1| 265|Homo sapiens neuronal membrane glyco... 31 2.4
AF016004-1|AAC28560.1| 265|Homo sapiens m6b1 protein. 31 2.4
U45955-1|AAB16888.1| 283|Homo sapiens M6b protein. 30 4.3
BC047295-1|AAH47295.1| 305|Homo sapiens glycoprotein M6B protein. 30 4.3
AK095657-1|BAC04600.1| 328|Homo sapiens protein ( Homo sapiens ... 30 4.3
AF037347-2|AAC19165.1| 283|Homo sapiens neuronal membrane glyco... 30 4.3
AB209525-1|BAD92762.1| 280|Homo sapiens glycoprotein M6B isofor... 30 4.3
>L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 387
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = -1
Query: 365 PTLALHARYTFCLISPVIKQPKHKSMNLKAAIQALTMMNII 243
P + H YTFC ++ ++ + +S+NLK+ +Q +T ++
Sbjct: 193 PGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQML 233
>L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 437
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1
Query: 365 PTLALHARYTFCLISPVIKQPKHKSMNLKAAIQALT 258
P + H YTFC ++ ++ + +S+NLK+ +Q +T
Sbjct: 243 PGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVT 278
>BC125230-1|AAI25231.1| 1462|Homo sapiens CAMSAP1L1 protein protein.
Length = 1462
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 393 DYYLPIKLYMDPSTRFLSDYDLCIHNILETVPPKPTNI 506
DY + + MD +++FL DYD+ N E + P P+ +
Sbjct: 615 DYTVSLDSDMDDASKFLQDYDIRTGNTREALSPCPSTV 652
>BC125229-1|AAI25230.1| 1489|Homo sapiens CAMSAP1L1 protein protein.
Length = 1489
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 393 DYYLPIKLYMDPSTRFLSDYDLCIHNILETVPPKPTNI 506
DY + + MD +++FL DYD+ N E + P P+ +
Sbjct: 642 DYTVSLDSDMDDASKFLQDYDIRTGNTREALSPCPSTV 679
>BC056910-1|AAH56910.1| 678|Homo sapiens CAMSAP1L1 protein protein.
Length = 678
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 393 DYYLPIKLYMDPSTRFLSDYDLCIHNILETVPPKPTNI 506
DY + + MD +++FL DYD+ N E + P P+ +
Sbjct: 57 DYTVSLDSDMDDASKFLQDYDIRTGNTREALSPCPSTV 94
>BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CAAX
box, beta protein.
Length = 437
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1
Query: 365 PTLALHARYTFCLISPVIKQPKHKSMNLKAAIQALT 258
P + H YTFC ++ ++ + +S+NLK+ +Q +T
Sbjct: 243 PGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVT 278
>AL450104-2|CAI17077.1| 1489|Homo sapiens calmodulin regulated
spectrin-associated protein 1-like 1 protein.
Length = 1489
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 393 DYYLPIKLYMDPSTRFLSDYDLCIHNILETVPPKPTNI 506
DY + + MD +++FL DYD+ N E + P P+ +
Sbjct: 642 DYTVSLDSDMDDASKFLQDYDIRTGNTREALSPCPSTV 679
>AL450104-1|CAI17076.1| 818|Homo sapiens calmodulin regulated
spectrin-associated protein 1-like 1 protein.
Length = 818
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 393 DYYLPIKLYMDPSTRFLSDYDLCIHNILETVPPKPTNI 506
DY + + MD +++FL DYD+ N E + P P+ +
Sbjct: 631 DYTVSLDSDMDDASKFLQDYDIRTGNTREALSPCPSTV 668
>AB029001-1|BAA83030.2| 1365|Homo sapiens KIAA1078 protein protein.
Length = 1365
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 393 DYYLPIKLYMDPSTRFLSDYDLCIHNILETVPPKPTNI 506
DY + + MD +++FL DYD+ N E + P P+ +
Sbjct: 518 DYTVSLDSDMDDASKFLQDYDIRTGNTREALSPCPSTV 555
>BC008151-1|AAH08151.1| 265|Homo sapiens glycoprotein M6B protein.
Length = 265
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 27 ERNLIYSQNF*PVGDACQAFLTRVPHATLIATIMCC*GVGVF 152
E N SQ + C L VP+A+L+ATI+C GV +F
Sbjct: 10 EENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALF 51
>AF047197-1|AAD13718.1| 265|Homo sapiens M6ba protein.
Length = 265
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 27 ERNLIYSQNF*PVGDACQAFLTRVPHATLIATIMCC*GVGVF 152
E N SQ + C L VP+A+L+ATI+C GV +F
Sbjct: 10 EENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALF 51
>AF037347-1|AAC19166.1| 265|Homo sapiens neuronal membrane
glycoprotein M6b protein.
Length = 265
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 27 ERNLIYSQNF*PVGDACQAFLTRVPHATLIATIMCC*GVGVF 152
E N SQ + C L VP+A+L+ATI+C GV +F
Sbjct: 10 EENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALF 51
>AF016004-1|AAC28560.1| 265|Homo sapiens m6b1 protein.
Length = 265
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 27 ERNLIYSQNF*PVGDACQAFLTRVPHATLIATIMCC*GVGVF 152
E N SQ + C L VP+A+L+ATI+C GV +F
Sbjct: 10 EENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALF 51
>U45955-1|AAB16888.1| 283|Homo sapiens M6b protein.
Length = 283
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DACQAFLTRVPHATLIATIMCC*GVGVF 152
+ C L VP+A+L+ATI+C GV +F
Sbjct: 42 ECCIKCLGGVPYASLVATILCFSGVALF 69
>BC047295-1|AAH47295.1| 305|Homo sapiens glycoprotein M6B protein.
Length = 305
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DACQAFLTRVPHATLIATIMCC*GVGVF 152
+ C L VP+A+L+ATI+C GV +F
Sbjct: 64 ECCIKCLGGVPYASLVATILCFSGVALF 91
>AK095657-1|BAC04600.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ38338 fis, clone FCBBF3027104, highly similar to
Mus musculus proteolipid M6B isoform
alpha-beta-TMD-omega (M6B) ).
Length = 328
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DACQAFLTRVPHATLIATIMCC*GVGVF 152
+ C L VP+A+L+ATI+C GV +F
Sbjct: 64 ECCIKCLGGVPYASLVATILCFSGVALF 91
>AF037347-2|AAC19165.1| 283|Homo sapiens neuronal membrane
glycoprotein M6b protein.
Length = 283
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DACQAFLTRVPHATLIATIMCC*GVGVF 152
+ C L VP+A+L+ATI+C GV +F
Sbjct: 42 ECCIKCLGGVPYASLVATILCFSGVALF 69
>AB209525-1|BAD92762.1| 280|Homo sapiens glycoprotein M6B isoform 1
variant protein.
Length = 280
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 69 DACQAFLTRVPHATLIATIMCC*GVGVF 152
+ C L VP+A+L+ATI+C GV +F
Sbjct: 16 ECCIKCLGGVPYASLVATILCFSGVALF 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,316,455
Number of Sequences: 237096
Number of extensions: 1458657
Number of successful extensions: 2315
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2315
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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