Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P06
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-3|AAK31486.2|  275|Caenorhabditis elegans Hypothetical pr...    57   7e-09
AL032657-11|CAA21737.3|  372|Caenorhabditis elegans Hypothetical...    33   0.12 
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family...    28   4.7  
Z81557-5|CAB04533.1|  345|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68006-7|CAA91995.2|  783|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr...    27   6.2  
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL132904-16|CAC35849.1|  340|Caenorhabditis elegans Hypothetical...    27   6.2  
AF497831-1|AAM18109.1|  783|Caenorhabditis elegans putative Na-H...    27   6.2  

>U23139-3|AAK31486.2|  275|Caenorhabditis elegans Hypothetical
           protein F13H8.4 protein.
          Length = 275

 Score = 57.2 bits (132), Expect = 7e-09
 Identities = 21/66 (31%), Positives = 37/66 (56%)
 Frame = +1

Query: 226 WIEKLQMIFIIVSACMAALRFMLLCLGCLITGDIRQKVYRAWRAKVGGRISCAGGMIITY 405
           W++K+Q+ FI+++  M       LC+G   TG  R+ +Y+   A+ GG+ +C   M+I +
Sbjct: 24  WLDKVQVFFIVIAVLMGLFSLFFLCIGFTATGGTRETMYKDDEARCGGKFACVIAMLIDF 83

Query: 406 LLSFIW 423
            L   W
Sbjct: 84  FLIIAW 89


>AL032657-11|CAA21737.3|  372|Caenorhabditis elegans Hypothetical
           protein Y47H9C.11 protein.
          Length = 372

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 393 DYYLPIKLYMDPSTRFLSDYDLCI-HNILETVPP 491
           D  L  ++  DP +R LSD  L I HNILE +PP
Sbjct: 85  DADLDCEMSWDPESRGLSDMPLAIVHNILENIPP 118


>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
           protein 3 protein.
          Length = 3343

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 396 YYLPIKLYMDPSTRFLSDYDLCIHNILETVP 488
           Y+LPI++++ P +  L + D+ +  I E+VP
Sbjct: 504 YHLPIRIHLPPPSTQLVEADVFVKVIQESVP 534


>Z81557-5|CAB04533.1|  345|Caenorhabditis elegans Hypothetical
           protein F59A1.10 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
 Frame = +3

Query: 360 SWRKNI-LCRWYDYYLPIKLY----MDPSTRFLSDY 452
           +W +N+ L +W+  Y P+KL+    +DP+  +L  Y
Sbjct: 83  NWFRNLSLHKWFAEYFPVKLHKTAELDPNQNYLFGY 118


>Z68006-7|CAA91995.2|  783|Caenorhabditis elegans Hypothetical
           protein K09C8.1 protein.
          Length = 783

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/79 (21%), Positives = 36/79 (45%)
 Frame = -1

Query: 353 LHARYTFCLISPVIKQPKHKSMNLKAAIQALTMMNIICNFSIHIRRKWITLSNITIERSD 174
           L    +F L+  +   P  K+  L A    +   NII   +I +  KW+   NI + + +
Sbjct: 472 LRGAVSFSLVFMISANPDVKNTMLGATYAVILFTNIIQGSTIKLFVKWL---NIRLAKKE 528

Query: 173 PRYIVPLKHSHALTTHNSR 117
             + + ++ ++ +  H S+
Sbjct: 529 DHFRLFIEFNNGMVQHLSQ 547


>Z66522-6|CAH04737.1| 1147|Caenorhabditis elegans Hypothetical protein
            F14E5.2b protein.
          Length = 1147

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/64 (21%), Positives = 26/64 (40%)
 Frame = -1

Query: 350  HARYTFCLISPVIKQPKHKSMNLKAAIQALTMMNIICNFSIHIRRKWITLSNITIERSDP 171
            H+R   CL+    KQ   K  + K + +    M     F + +   W   +N+ +E  + 
Sbjct: 1053 HSRIVMCLMDSADKQELSKECSTKLSDRNKLWMKAHSEFQMALPDSWHAFANLVMEHPER 1112

Query: 170  RYIV 159
              I+
Sbjct: 1113 NSIL 1116


>Z66522-5|CAA91405.1| 1149|Caenorhabditis elegans Hypothetical protein
            F14E5.2a protein.
          Length = 1149

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/64 (21%), Positives = 26/64 (40%)
 Frame = -1

Query: 350  HARYTFCLISPVIKQPKHKSMNLKAAIQALTMMNIICNFSIHIRRKWITLSNITIERSDP 171
            H+R   CL+    KQ   K  + K + +    M     F + +   W   +N+ +E  + 
Sbjct: 1055 HSRIVMCLMDSADKQELSKECSTKLSDRNKLWMKAHSEFQMALPDSWHAFANLVMEHPER 1114

Query: 170  RYIV 159
              I+
Sbjct: 1115 NSIL 1118


>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
           protein F13B9.1c protein.
          Length = 1609

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 182 RSDPRYIVPLKHSHALTTH 126
           R+D R  VPL HSH+ T H
Sbjct: 554 RNDGRTSVPLHHSHSFTEH 572


>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
           protein F13B9.1b protein.
          Length = 1614

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 182 RSDPRYIVPLKHSHALTTH 126
           R+D R  VPL HSH+ T H
Sbjct: 554 RNDGRTSVPLHHSHSFTEH 572


>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
           protein F13B9.1a protein.
          Length = 1632

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 182 RSDPRYIVPLKHSHALTTH 126
           R+D R  VPL HSH+ T H
Sbjct: 554 RNDGRTSVPLHHSHSFTEH 572


>AL132904-16|CAC35849.1|  340|Caenorhabditis elegans Hypothetical
           protein Y111B2A.20 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 343 RAWRAKVGGRISCAGGMIITYLL 411
           R+W A+ G  + CAGG++I Y +
Sbjct: 15  RSWLAESGHFLICAGGILICYFV 37


>AF497831-1|AAM18109.1|  783|Caenorhabditis elegans putative Na-H
           exchanger isoform 7 protein.
          Length = 783

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/79 (21%), Positives = 36/79 (45%)
 Frame = -1

Query: 353 LHARYTFCLISPVIKQPKHKSMNLKAAIQALTMMNIICNFSIHIRRKWITLSNITIERSD 174
           L    +F L+  +   P  K+  L A    +   NII   +I +  KW+   NI + + +
Sbjct: 472 LRGAVSFSLVFMISANPDVKNTMLGATYAVILFTNIIQGSTIKLFVKWL---NIRLAKKE 528

Query: 173 PRYIVPLKHSHALTTHNSR 117
             + + ++ ++ +  H S+
Sbjct: 529 DHFRLFIEFNNGMVQHLSQ 547


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,116,994
Number of Sequences: 27780
Number of extensions: 245612
Number of successful extensions: 565
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)