Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_P05
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 66 1e-11
01_06_0824 - 32243495-32244319,32244449-32244859 64 8e-11
11_02_0011 - 7337618-7338496,7338596-7338991 60 2e-09
04_04_0619 + 26652923-26653267,26653440-26654273 57 9e-09
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 56 2e-08
11_01_0750 - 6315126-6315896,6316371-6316784 56 2e-08
11_02_0012 - 7346282-7347136,7347234-7347593 54 8e-08
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 52 5e-07
11_01_0771 + 6453130-6454488 48 6e-06
11_02_0014 - 7352619-7352918,7353173-7353418 46 2e-05
11_01_0767 + 6438648-6438809,6439146-6440000 42 3e-04
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.010
04_03_0260 - 13580396-13582990 28 4.8
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 28 4.8
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 28 4.8
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 6.3
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 27 8.4
02_01_0074 + 519401-519512,519513-519548,519647-519706,519785-51... 27 8.4
>01_01_1152 + 9170628-9171899
Length = 423
Score = 66.5 bits (155), Expect = 1e-11
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Frame = +3
Query: 156 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVD 332
++ I+S S LA +A + GE+ ELL + P+ + ++ T L ++R +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 333 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIK 509
A V++ G L +FA + + + + +F E+A +N +V D T I+
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 510 NLVDPSSLDSSTQCVLVNAIYFKGSW 587
+++ P+S+DSST VL NA++FKG+W
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTW 202
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 64.1 bits (149), Expect = 8e-11
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Frame = +3
Query: 153 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTKAVFTDLNQK 308
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 309 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 485
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 486 DHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
T RIK+ + ++D +T VL NA+YFKG W
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDW 184
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 59.7 bits (138), Expect = 2e-09
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Frame = +3
Query: 153 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRS 317
+K+++ S S+ LA +A + G + DELL ++D ++V +AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 318 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHT 494
G + A V+ EL + + + + + NF + + + IN WV T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 495 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
NK I ++ S+ T VLVNAIYFKG W
Sbjct: 149 NKLIPEILPDGSVHVDTALVLVNAIYFKGKW 179
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 57.2 bits (132), Expect = 9e-09
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Frame = +3
Query: 165 ILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLA 344
+ S + LA LA + GE+ +LL + + + A L ++R+ L A
Sbjct: 23 MFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFA 80
Query: 345 NKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRIKNLVD 521
+++ L +F + + ++++F AA +N ++ TN R+ N +
Sbjct: 81 AGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTIS 140
Query: 522 PSSLDSSTQCVLVNAIYFKGSW 587
P + SST+CVL NA++FK +W
Sbjct: 141 PGTFGSSTKCVLANAMHFKATW 162
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 441 GKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
GK E A+ +N+WVE T+ IK ++ P S+D +T+ VL NA+YFKG+W
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 256
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3
Query: 453 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
E +N+WV+ T+ IKN+ P S++ +T+ VL NA+YFKG+W
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAW 508
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +3
Query: 324 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 500
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV+D T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 501 RIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
+ L+ ++D +T VL +A+YF+G W
Sbjct: 157 TVTTLLPAGTIDQNTGLVLGSALYFRGRW 185
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 54.0 bits (124), Expect = 8e-08
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Frame = +3
Query: 147 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKG 326
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 327 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTN 497
V++ LA++ + G ++ V R + +F + +++ IN WV TN
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 498 KRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
K I+ ++ S+ T VLVNAIYFKG W
Sbjct: 138 KLIREILPDGSVHGGTALVLVNAIYFKGKW 167
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 51.6 bits (118), Expect = 5e-07
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = +3
Query: 453 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
E A+ +N+WV+ T+ IK ++ P S+D +T+ VL NA+YFKG+W
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 48
>11_01_0771 + 6453130-6454488
Length = 452
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +3
Query: 444 KNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
K EEA IN W T K I +++ P S+ T VL NAIYFKG W
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKW 216
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/40 (52%), Positives = 24/40 (60%)
Frame = +3
Query: 468 INTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
IN WV TNK I ++ S+ T VLVNAIYFKG W
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKW 129
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 453 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSW 587
EA IN WV T I ++ P S T+ V+ NAIYFKG W
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 225 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 398
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 399 S--RDVFNSEVQNLNFGKNEEAANI 467
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>04_03_0260 - 13580396-13582990
Length = 864
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 387 FAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 536
F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 737 FGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNNQLIDMIDKHSSD 785
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 384 QFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 536
+F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 531 KFGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSND 580
>01_07_0197 +
41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 435 NFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSST 545
N K + + + TWV+ ++ + L+D ++LDSST
Sbjct: 490 NKRKRDATSELSETWVQCDACRKWRRLLDGTALDSST 526
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 472 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 341
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 541 LLSNELGSTKFLIRLLVWSSTQVLIMLAASSFLPK 437
L +NELG +FL+ +++W + L + S K
Sbjct: 356 LANNELGEYEFLVAIVIWYEVLYAVNLVSKSLQGK 390
>02_01_0074 +
519401-519512,519513-519548,519647-519706,519785-519877,
519968-520033,520146-520223,520300-520407,520478-520554,
520632-520706,520792-520799,520981-521098,521199-521625,
521627-521661
Length = 430
Score = 27.5 bits (58), Expect = 8.4
Identities = 26/99 (26%), Positives = 41/99 (41%)
Frame = +3
Query: 264 NDNVTKAVFTDLNQKVRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFG 443
N ++ + +LNQK +SI Y+A + +N A N EV F
Sbjct: 324 NASIDRKYIPELNQKFKSIDEAQNYFNFYAYMAGFSIVNAHSARTLSKKRNGEVIRETFK 383
Query: 444 KNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLV 560
N+ + N E T++R N V + + +CVLV
Sbjct: 384 YNKYVKSDCNKKEETITSERKTNEV----IGTECKCVLV 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,731,457
Number of Sequences: 37544
Number of extensions: 244821
Number of successful extensions: 644
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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