Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P01
         (388 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ...    90   3e-18
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.         90   3e-18
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.     90   3e-18
AL390029-3|CAI15722.1|  363|Homo sapiens doublecortin and CaM ki...    29   5.2  
AL160392-3|CAH70263.1|  363|Homo sapiens doublecortin and CaM ki...    29   5.2  
AL157760-3|CAH70169.1|  363|Homo sapiens doublecortin and CaM ki...    29   5.2  
AL157694-3|CAH70658.1|  363|Homo sapiens doublecortin and CaM ki...    29   5.2  

>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 46 protein.
          Length = 1031

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 50/84 (59%), Positives = 58/84 (69%)
 Frame = +3

Query: 117  VMFKEALALISEYSEAGITVRGTYVXXXXXXXXXXRKLYLAIESSQELAVAKAKSEITRL 296
            V  KEAL  ISEYSEA IT+RGTY           RK+YLAIES+ ELAV KAK+EITRL
Sbjct: 949  VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL 1008

Query: 297  ITEELLKLQTSAHHMVDKARYTVL 368
            I EEL++LQ S +   +K RY VL
Sbjct: 1009 IKEELIRLQNS-YQPTNKGRYKVL 1031


>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
          Length = 1031

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 50/84 (59%), Positives = 58/84 (69%)
 Frame = +3

Query: 117  VMFKEALALISEYSEAGITVRGTYVXXXXXXXXXXRKLYLAIESSQELAVAKAKSEITRL 296
            V  KEAL  ISEYSEA IT+RGTY           RK+YLAIES+ ELAV KAK+EITRL
Sbjct: 949  VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL 1008

Query: 297  ITEELLKLQTSAHHMVDKARYTVL 368
            I EEL++LQ S +   +K RY VL
Sbjct: 1009 IKEELIRLQNS-YQPTNKGRYKVL 1031


>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
          Length = 1058

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 50/84 (59%), Positives = 58/84 (69%)
 Frame = +3

Query: 117  VMFKEALALISEYSEAGITVRGTYVXXXXXXXXXXRKLYLAIESSQELAVAKAKSEITRL 296
            V  KEAL  ISEYSEA IT+RGTY           RK+YLAIES+ ELAV KAK+EITRL
Sbjct: 976  VTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRL 1035

Query: 297  ITEELLKLQTSAHHMVDKARYTVL 368
            I EEL++LQ S +   +K RY VL
Sbjct: 1036 IKEELIRLQNS-YQPTNKGRYKVL 1058


>AL390029-3|CAI15722.1|  363|Homo sapiens doublecortin and CaM
           kinase-like 1 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 148 ASTRKPASRSGALTYRPGSRRPTA--NGNSI*L*RAPRNWPWPKPSPKSHGS*RKNF*NY 321
           +S+R+  ++S   + R  S   T+  NG        PR+   P PSP S GS RK    Y
Sbjct: 289 SSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRDLY 348

Query: 322 RP 327
           RP
Sbjct: 349 RP 350


>AL160392-3|CAH70263.1|  363|Homo sapiens doublecortin and CaM
           kinase-like 1 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 148 ASTRKPASRSGALTYRPGSRRPTA--NGNSI*L*RAPRNWPWPKPSPKSHGS*RKNF*NY 321
           +S+R+  ++S   + R  S   T+  NG        PR+   P PSP S GS RK    Y
Sbjct: 289 SSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRDLY 348

Query: 322 RP 327
           RP
Sbjct: 349 RP 350


>AL157760-3|CAH70169.1|  363|Homo sapiens doublecortin and CaM
           kinase-like 1 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 148 ASTRKPASRSGALTYRPGSRRPTA--NGNSI*L*RAPRNWPWPKPSPKSHGS*RKNF*NY 321
           +S+R+  ++S   + R  S   T+  NG        PR+   P PSP S GS RK    Y
Sbjct: 289 SSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRDLY 348

Query: 322 RP 327
           RP
Sbjct: 349 RP 350


>AL157694-3|CAH70658.1|  363|Homo sapiens doublecortin and CaM
           kinase-like 1 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +1

Query: 148 ASTRKPASRSGALTYRPGSRRPTA--NGNSI*L*RAPRNWPWPKPSPKSHGS*RKNF*NY 321
           +S+R+  ++S   + R  S   T+  NG        PR+   P PSP S GS RK    Y
Sbjct: 289 SSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRDLY 348

Query: 322 RP 327
           RP
Sbjct: 349 RP 350


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,317,491
Number of Sequences: 237096
Number of extensions: 893636
Number of successful extensions: 1725
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)