Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_P01
         (388 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64847-8|AAQ91904.1|  558|Caenorhabditis elegans Acyltransferase...    27   4.6  
U64847-7|AAB04876.1|  718|Caenorhabditis elegans Acyltransferase...    27   4.6  
U21308-2|AAB93313.3|  507|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopam...    26   8.1  

>U64847-8|AAQ91904.1|  558|Caenorhabditis elegans
           Acyltransferase-like protein 6,isoform b protein.
          Length = 558

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 354 LLCRPCDVLRSVVSKVL 304
           + CRPCD LR +V  VL
Sbjct: 389 MFCRPCDSLRELVHNVL 405


>U64847-7|AAB04876.1|  718|Caenorhabditis elegans
           Acyltransferase-like protein 6,isoform a protein.
          Length = 718

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 354 LLCRPCDVLRSVVSKVL 304
           + CRPCD LR +V  VL
Sbjct: 549 MFCRPCDSLRELVHNVL 565


>U21308-2|AAB93313.3|  507|Caenorhabditis elegans Hypothetical
           protein ZK1290.6 protein.
          Length = 507

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 236 SYRELPGTGRGQSQVRNHTAHNGRTFE 316
           S+  L  T R  S  R+H+AH+ RTFE
Sbjct: 282 SHDVLSPTNRSGSVHRSHSAHHERTFE 308


>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
            T28B8.3a protein.
          Length = 1838

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 258  LAVAKAKSEITRLITEELLKLQTSAHHMVDKARYTV 365
            L + K  S+ T  +TEE LK+QT      +K  +T+
Sbjct: 1125 LLLIKPSSDWTPFLTEEALKIQTDTWFDYEKLSHTL 1160


>Z81101-6|CAE53732.1|  840|Caenorhabditis elegans Hypothetical
           protein K09G1.4b protein.
          Length = 840

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = -1

Query: 385 NDRGNDKTVYLALSTM*CAEVCSFKSSSVMSRVISDLALATASSWELSIA 236
           +D G+D   Y A +     E  + +++S++ R+I+  ++ TA+S   S+A
Sbjct: 316 DDAGDDDDDYHADNGQGVVEASAPRTTSMLRRIINAASVGTANSTAQSVA 365


>AB125701-1|BAD01495.1|  840|Caenorhabditis elegans D2-like dopamine
           receptor longvariant protein.
          Length = 840

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = -1

Query: 385 NDRGNDKTVYLALSTM*CAEVCSFKSSSVMSRVISDLALATASSWELSIA 236
           +D G+D   Y A +     E  + +++S++ R+I+  ++ TA+S   S+A
Sbjct: 316 DDAGDDDDDYHADNGQGVVEASAPRTTSMLRRIINAASVGTANSTAQSVA 365


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,571,975
Number of Sequences: 27780
Number of extensions: 127980
Number of successful extensions: 298
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)