Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_O22
(502 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0386 + 33555682-33556344,33557138-33557299 198 2e-51
07_01_0756 + 5819367-5820038,5820847-5821005 194 4e-50
03_04_0238 - 19219040-19219218,19220296-19220350,19221606-192216... 47 1e-05
07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871 41 5e-04
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 36 0.014
05_01_0214 - 1615519-1616775 34 0.074
05_01_0197 - 1417672-1417899,1418921-1418974,1419267-1419552,142... 34 0.074
07_01_0857 - 7127681-7127830,7128896-7129414 31 0.39
10_07_0161 - 13674631-13675433,13675793-13675862 31 0.52
09_04_0377 + 17086775-17088310 31 0.52
03_05_0292 + 22846273-22846377,22847161-22847823 31 0.69
03_02_0261 - 6933962-6934513 31 0.69
03_01_0031 + 292335-292844 30 0.91
11_03_0109 - 10103163-10103262,10103469-10103800,10103963-10104121 29 2.1
05_03_0456 - 14259233-14259235,14259866-14260384 29 2.8
04_04_0534 + 26071227-26071811 29 2.8
06_03_0892 - 25713502-25714125,25714309-25715199 28 3.7
11_01_0395 + 2999855-2999920,3000605-3002191 28 4.8
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 27 6.4
10_02_0115 + 5445580-5445606,5446118-5446609 27 6.4
08_02_0707 - 20212190-20214592 27 6.4
03_05_0422 - 24076917-24077125,24077209-24077266,24077350-240773... 27 6.4
02_04_0551 + 23801464-23801802 27 6.4
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 27 8.5
12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937 27 8.5
07_01_0768 - 5905493-5905740,5905953-5906037 27 8.5
03_06_0422 + 33818887-33819996 27 8.5
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 198 bits (484), Expect = 2e-51
Identities = 89/120 (74%), Positives = 108/120 (90%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 321
++++++WVPVTKLGRLV+EG+ K+E IYL SLP+KE +I++ + P L DEV+KI PVQ
Sbjct: 38 RQEEEKWVPVTKLGRLVKEGRFSKIEEIYLHSLPVKEHQIVETLV-PGLKDEVMKITPVQ 96
Query: 322 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 501
KQTRAGQRTRFKAFV +GDNNGH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 97 KQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNK 156
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 194 bits (472), Expect = 4e-50
Identities = 88/120 (73%), Positives = 107/120 (89%)
Frame = +1
Query: 142 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 321
++++++WVPVTKLGRLV+E KI K+E IYL SLP+KE +I++ + P L DEV+KI PVQ
Sbjct: 41 RQEEEKWVPVTKLGRLVKENKIHKIEEIYLHSLPVKEHQIVEQLV-PGLKDEVMKITPVQ 99
Query: 322 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 501
KQTRAGQRTRFKAFV +GD +GH+GLGVKC+KEVATAIRGAIILAKLSV+PVRRGYWGNK
Sbjct: 100 KQTRAGQRTRFKAFVVVGDGDGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNK 159
>03_04_0238 -
19219040-19219218,19220296-19220350,19221606-19221690,
19222068-19222798
Length = 349
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +1
Query: 289 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 468
++ V+++ V K + G++ F+A V +GD GH+G+GV +KEV AI A + + ++
Sbjct: 171 SERVVQVNRVTKVVKGGRQLSFRAIVVVGDMKGHVGVGVGKAKEVTEAITKAAMNGRRNL 230
Query: 469 LPV 477
+ V
Sbjct: 231 VTV 233
>07_03_0099 + 13387533-13387641,13387647-13387864,13388497-13388871
Length = 233
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 361 FVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 456
FV +GD + HI LGVKC+K AT + GAIILA
Sbjct: 2 FVVVGDGDSHIELGVKCAK--ATTMSGAIILA 31
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 42 WRFP-RRLWIPWWRQRSWRPTWSWSRTRARPWPWQGRP 152
W F RR WIPW +R+ + WS S T R W Q RP
Sbjct: 184 WSFEWRRGWIPWEARRASKSAWSQSSTGTRKW-MQYRP 220
>05_01_0214 - 1615519-1616775
Length = 418
Score = 33.9 bits (74), Expect = 0.074
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 139 HGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVH 35
HGHG DHDH G D HH G+ H H
Sbjct: 190 HGHGHGHSHDHDH-GGSDHDHHHHEDQEHGHVHHH 223
>05_01_0197 -
1417672-1417899,1418921-1418974,1419267-1419552,
1421768-1422291
Length = 363
Score = 33.9 bits (74), Expect = 0.074
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 15 GGRSSSRWTWRFPRRLWIPWWRQRSWRP 98
G W WR P RL W R RSW P
Sbjct: 133 GNEEGELWLWRRPSRLLSKWRRGRSWAP 160
>07_01_0857 - 7127681-7127830,7128896-7129414
Length = 222
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 33 RWTWRFPRRLWIPW-WRQRSWR 95
RW WR+ R W P WR+R WR
Sbjct: 109 RWDWRWRRCHWRPQRWRRRRWR 130
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +3
Query: 15 GGRSSSRWTWRFPRRLWIPWWRQR-SWRPTWSWSRTRARPWPWQGRPERVGASHQAWS 185
GG+ + W P + PW Q+ +WRP S W G P G SH W+
Sbjct: 223 GGQGNPSWRPAGPWVCFNPWPAQQLAWRPPPPPSPLSWSSWAGSGGPLFPGTSHLRWA 280
>09_04_0377 + 17086775-17088310
Length = 511
Score = 31.1 bits (67), Expect = 0.52
Identities = 20/55 (36%), Positives = 24/55 (43%)
Frame = +3
Query: 21 RSSSRWTWRFPRRLWIPWWRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWS 185
R S +R RR W P+ R R W+R R P P +G GA AWS
Sbjct: 55 RDRSPSPYRDRRRQWSPYHRDRGRDVEREWARDRDHPAPRRGGG---GAGAGAWS 106
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 30.7 bits (66), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 78 RQRSWRPTWSWSRTRAR 128
R+RSWR WSW R R R
Sbjct: 157 RRRSWRRQWSWRRRRRR 173
>03_02_0261 - 6933962-6934513
Length = 183
Score = 30.7 bits (66), Expect = 0.69
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 78 RQRSWRPTWSWSRTRAR 128
R+RSWR WSW R R R
Sbjct: 116 RRRSWRRQWSWRRRRRR 132
>03_01_0031 + 292335-292844
Length = 169
Score = 30.3 bits (65), Expect = 0.91
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 63 WIPWWRQRSWRPTWSWSR 116
W W R+R WR W W R
Sbjct: 39 WRRWRRRRGWRRRWGWQR 56
>11_03_0109 - 10103163-10103262,10103469-10103800,10103963-10104121
Length = 196
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 18 GRSSSRWTWR-FPRRLWIPWWRQRSWRP 98
G+ RW W +P R WI WRQR P
Sbjct: 128 GQGLHRWMWLIWPWRRWIQPWRQRRVDP 155
>05_03_0456 - 14259233-14259235,14259866-14260384
Length = 173
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 15 GGRSSSRWTWRFPRRLWIPWWR-QRSWRPTWSWSRTRAR 128
G R + W R+ RRL R +R WRP W R R R
Sbjct: 57 GDRLDAEWRSRWQRRLARRERRGRRRWRPAWHKRRNRWR 95
>04_04_0534 + 26071227-26071811
Length = 194
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 15 GGRSSSRWTWRFP--RRLWIPWWRQRSWRPTWSWSRTRARP--WPWQGRPERVGASH 173
G R ++R R P RR W R +WR +W RT ++P +P G P G H
Sbjct: 89 GARLATRRRGRRPARRRRDCAWRRPAAWRWLTTWRRTASKPDGYP-SGMPVPDGHEH 144
>06_03_0892 - 25713502-25714125,25714309-25715199
Length = 504
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 169 LAPTLSGLPCHGHGRARVRDHDHVGRHDLCRHHG 68
L P+ GLP GH V HV DL R HG
Sbjct: 35 LPPSPWGLPVIGHLHHLVGALPHVAMRDLARRHG 68
>11_01_0395 + 2999855-2999920,3000605-3002191
Length = 550
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 229 LFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRT 348
+F +++ ++IDF L L D + I+P+ R G++T
Sbjct: 237 MFGRRVEKEKVIDFLLCSDLPDTYVSILPIIGPHRIGKKT 276
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 145 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLG 279
+ KE +P G V G+ +++ + SLPIK++ + FF G
Sbjct: 805 DGSKEVIPQEYCGLEVLSGEAAWSKNVLVPSLPIKKYPVHSFFSG 849
>10_02_0115 + 5445580-5445606,5446118-5446609
Length = 172
Score = 27.5 bits (58), Expect = 6.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 63 WIPWWRQRSWRPTWS 107
W+ W R+R WR WS
Sbjct: 27 WVAWRRRRRWRIRWS 41
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -1
Query: 142 CHGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHRLELRPPLL 8
CHGH DH H HD HH ++ + + P +L
Sbjct: 580 CHGH------DHHHHHHHDHSEHHQQSGDHAHQDISNISSDPAIL 618
>03_05_0422 -
24076917-24077125,24077209-24077266,24077350-24077399,
24077494-24077754,24077837-24078230,24081256-24081366,
24082255-24082596
Length = 474
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 76 HHGIQSRRGNRHVHRLELRPP 14
HH RRG+RH +LRPP
Sbjct: 5 HHHHHPRRGSRHAAAGDLRPP 25
>02_04_0551 + 23801464-23801802
Length = 112
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 72 WWRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWSPC 191
W R RS R W R R P PW+ R + W+ C
Sbjct: 30 WSRSRSRR---HWRRRR-EPRPWRRRQRGAAGGGRTWTTC 65
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 169 LAPTLSGLPCHGHG---RARVRDHDHVGR-HDLCRHH 71
+AP L L C G G R RVR +VGR H L RHH
Sbjct: 76 VAPCLLTLQCSGVGWGVRKRVR---YVGRHHHLARHH 109
>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
Length = 418
Score = 27.1 bits (57), Expect = 8.5
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -1
Query: 169 LAPTLSGLPCHGHG---RARVRDHDHVGR-HDLCRHH 71
+AP L L C G G R RVR +VGR H L RHH
Sbjct: 67 VAPCLLTLQCSGVGWGVRKRVR---YVGRHHHLARHH 100
>07_01_0768 - 5905493-5905740,5905953-5906037
Length = 110
Score = 27.1 bits (57), Expect = 8.5
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Frame = +3
Query: 99 TWSW-----SRTR-ARPWPWQGRPERVGASHQAWSPC 191
TW+W R R A P PW+ R E G H + C
Sbjct: 2 TWTWRLLLAERPRMAPPHPWEPRAEAAGVRHVRGTSC 38
>03_06_0422 + 33818887-33819996
Length = 369
Score = 27.1 bits (57), Expect = 8.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 408 VQQGSGNCYPWCHHTRQIV 464
++QG G+ Y WCHH +++
Sbjct: 1 MEQGQGDRY-WCHHCEEVI 18
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,547,009
Number of Sequences: 37544
Number of extensions: 293824
Number of successful extensions: 987
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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