Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_O21
(406 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 27 0.081
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.14
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 1.7
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 1.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 1.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 1.7
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 1.7
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 22 3.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 5.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 7.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 7.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 20 9.3
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 27.1 bits (57), Expect = 0.081
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 362 SPPLQPLFPYALEQSIRFCS-DSDTRYPVF 276
SPPL FP A + I+ CS + D+ Y +F
Sbjct: 172 SPPLLGCFPRATNRDIKKCSYNMDSSYVIF 201
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 26.2 bits (55), Expect = 0.14
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 28 DMLHHEFVQAMNGFNKTTKHNKGLYGKSG 114
D H+ + NG + TT HN+ L G G
Sbjct: 395 DSARHQRIGGCNGLHTTTAHNRFLGGIGG 423
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +3
Query: 174 LAQEGLRHRGQGPWQVRQLLGFQHHW 251
L +E +R + G W + F+ +W
Sbjct: 66 LMKERIRQKAAGHWVIHPCSSFRFYW 91
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +3
Query: 174 LAQEGLRHRGQGPWQVRQLLGFQHHW 251
L +E +R + G W + F+ +W
Sbjct: 66 LMKERIRQKAAGHWVIHPCSSFRFYW 91
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 94 PCCVWWFC*SRSSPA 50
PCC W C + ++PA
Sbjct: 487 PCCWWKICWTITTPA 501
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 94 PCCVWWFC*SRSSPA 50
PCC W C + ++PA
Sbjct: 540 PCCWWKICWTITTPA 554
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 1.7
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +3
Query: 174 LAQEGLRHRGQGPWQVRQLLGFQHHW 251
L +E +R + G W + F+ +W
Sbjct: 66 LMKERIRQKAAGHWVIHPCSSFRFYW 91
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.8 bits (44), Expect = 3.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 302 DSDTRYPVFLKCCPSSDPVVLKAQQLPHLPWSLTS 198
DS T+Y + LK ++P++L A + HL L S
Sbjct: 102 DSVTKYLIHLKEIEDTEPILLIA-YIYHLYMGLLS 135
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 5.3
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = +1
Query: 334 YGNNGCNGGLMDNAFKYIKDNG 399
Y +G NG +DN + + G
Sbjct: 1274 YDGSGANGSFLDNLIRSSLETG 1295
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 214 GKCGSCWAFSTTGSL 258
G C W FST+ SL
Sbjct: 74 GNCCVIWIFSTSKSL 88
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 7.0
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 214 GKCGSCWAFSTTGSL 258
G C W FST+ SL
Sbjct: 74 GNCCVIWIFSTSKSL 88
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 20.2 bits (40), Expect = 9.3
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 144 RARHLPGPGRLAQEGLRHRG 203
R L PG A +RHRG
Sbjct: 194 RVTFLDTPGHAAFISMRHRG 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.134 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,138
Number of Sequences: 438
Number of extensions: 1622
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10132494
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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