Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_O14
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z82052-2|CAB04824.1|  318|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81487-2|CAB04000.1|  318|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p...    28   4.7  
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p...    28   4.7  
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p...    28   4.7  
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g...    27   8.2  

>Z78417-9|CAI70407.1|  700|Caenorhabditis elegans Hypothetical
           protein C35C5.11 protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -2

Query: 369 LIGNLW-YWTPILSCTKPTPLGSIMMSLSNGFTKFSFILRGRPITISMSNSSGFLIRNLS 193
           L+GN +  WT       P  + S ++ ++     +  +   RP+T ++    GFL R++ 
Sbjct: 351 LVGNHYDAWT--YGAVDPNSVTSTLLEVTRALKAYQNLTGWRPVTFTLVLKMGFLTRSI- 407

Query: 192 K*LPANWTVLEYLL*YKSTSF 130
             L A+W   EY L   ST F
Sbjct: 408 --LFAHWDAEEYGL-IGSTEF 425


>Z82052-2|CAB04824.1|  318|Caenorhabditis elegans Hypothetical
           protein T25E12.6 protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 24/116 (20%), Positives = 51/116 (43%)
 Frame = +2

Query: 41  YIRFIQLKSDEFVLHYKVFDSIFQHLHKKMKEVDLYYNRYSSTVQFAGSHFDKLRIKKPD 220
           Y+R I L +  +V    + + I     K+ KE++       +    + +HF+ LRI+ P+
Sbjct: 179 YLRRICLFNPLYVSPTVIDNIITTEQWKQAKELNTMTGEPVAFPVESHAHFESLRIRIPE 238

Query: 221 EFDMDIVIGLPLNINENFVNPLESDIIIEPNGVGFVQLRMGVQYQRLPMRDGYDWQ 388
              +D+++ +   +N+      E  +        F+   MG+ ++  P    Y W+
Sbjct: 239 LKQIDVILLVLKYLNQKTPKDNEIGVQNVSELFDFMWGSMGIPHENDPETIRYTWK 294


>Z81487-2|CAB04000.1|  318|Caenorhabditis elegans Hypothetical
           protein C54E10.3 protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 319 YTIGFNYDVTF*WIYKVFIYIKGKTNNNIHVKFIRFFN 206
           Y++ F    T   I+  F+YI GKT  N+H  F+ FF+
Sbjct: 35  YSVLFVGFFTLLIIFLSFLYIHGKTGKNVH--FLPFFS 70


>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
           protein K07E12.1b protein.
          Length = 12268

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 307 TQWCRFRTAKNGCPVPEVAYERWLRLASEQSG 402
           TQ   FR   +G P+P V+Y  WL + + +SG
Sbjct: 843 TQPIHFRCVADGRPMPSVSYS-WLPINASESG 873


>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
           protein K07E12.1a protein.
          Length = 13100

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 307 TQWCRFRTAKNGCPVPEVAYERWLRLASEQSG 402
           TQ   FR   +G P+P V+Y  WL + + +SG
Sbjct: 906 TQPIHFRCVADGRPMPSVSYS-WLPINASESG 936


>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
           protein.
          Length = 13100

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +1

Query: 307 TQWCRFRTAKNGCPVPEVAYERWLRLASEQSG 402
           TQ   FR   +G P+P V+Y  WL + + +SG
Sbjct: 906 TQPIHFRCVADGRPMPSVSYS-WLPINASESG 936


>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
           glp-1 protein.
          Length = 1492

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = +2

Query: 14  NLNSLLADIYIRFIQLKSDEF-VLHYKVFDSIFQHLHKKMKEVDLYYNRYSSTVQFAGSH 190
           N+   +   Y +   LKS  + V+ Y  F    +   KKM     YYN  +  ++   S+
Sbjct: 242 NIPESVQRYYAKICSLKSAMYAVIAYMSFGDNLEKEDKKMGWRLQYYNIANKYMELLSSN 301

Query: 191 FDKLRIKKPDEF 226
             K+R + P+ F
Sbjct: 302 HSKMRERYPELF 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,532,411
Number of Sequences: 27780
Number of extensions: 325383
Number of successful extensions: 788
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)