Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_O13
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011674-1|AAH11674.1| 738|Homo sapiens procollagen-lysine, 2-o... 56 1e-07
AY220458-1|AAO61775.1| 738|Homo sapiens lysyl hydroxylase 3 pro... 56 1e-07
AF207069-1|AAF63701.1| 738|Homo sapiens lysyl hydroxylase 3 pro... 56 1e-07
AF068229-1|AAC34808.1| 738|Homo sapiens lysyl hydroxylase 3 pro... 56 1e-07
AF046889-1|AAC39753.1| 738|Homo sapiens lysyl hydroxylase isofo... 56 1e-07
AC004876-5|AAD45831.1| 738|Homo sapiens lysyl hydroxylase 3 pro... 56 1e-07
U84573-1|AAB58363.1| 737|Homo sapiens lysyl hydroxylase isoform... 55 2e-07
L06419-1|AAA60116.1| 727|Homo sapiens lysyl hydroxylase protein. 55 2e-07
BC037169-1|AAH37169.1| 758|Homo sapiens procollagen-lysine, 2-o... 55 2e-07
BC016834-1|AAH16834.1| 210|Homo sapiens PLOD2 protein protein. 55 2e-07
BC016657-1|AAH16657.1| 727|Homo sapiens procollagen-lysine 1, 2... 55 2e-07
AL096840-6|CAC19722.1| 727|Homo sapiens procollagen-lysine 1, 2... 55 2e-07
AF490527-1|AAM12752.1| 727|Homo sapiens lysyl hydroxylase protein. 55 2e-07
AB209879-1|BAD93116.1| 796|Homo sapiens procollagen-lysine, 2-o... 55 2e-07
>BC011674-1|AAH11674.1| 738|Homo sapiens procollagen-lysine,
2-oxoglutarate 5-dioxygenase 3 protein.
Length = 738
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYIM+SFVDP
Sbjct: 711 HPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
>AY220458-1|AAO61775.1| 738|Homo sapiens lysyl hydroxylase 3
protein.
Length = 738
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYIM+SFVDP
Sbjct: 711 HPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
>AF207069-1|AAF63701.1| 738|Homo sapiens lysyl hydroxylase 3
protein.
Length = 738
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYIM+SFVDP
Sbjct: 711 HPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
>AF068229-1|AAC34808.1| 738|Homo sapiens lysyl hydroxylase 3
protein.
Length = 738
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYIM+SFVDP
Sbjct: 711 HPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
>AF046889-1|AAC39753.1| 738|Homo sapiens lysyl hydroxylase isoform
3 protein.
Length = 738
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYIM+SFVDP
Sbjct: 711 HPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
>AC004876-5|AAD45831.1| 738|Homo sapiens lysyl hydroxylase 3
protein.
Length = 738
Score = 56.0 bits (129), Expect = 1e-07
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYIM+SFVDP
Sbjct: 711 HPGRLTHYHEGLPTTWGTRYIMVSFVDP 738
>U84573-1|AAB58363.1| 737|Homo sapiens lysyl hydroxylase isoform 2
protein.
Length = 737
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH HEGL V NGTRYI +SF+DP
Sbjct: 710 HPGRLTHLHEGLPVKNGTRYIAVSFIDP 737
>L06419-1|AAA60116.1| 727|Homo sapiens lysyl hydroxylase protein.
Length = 727
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYI +SFVDP
Sbjct: 700 HPGRLTHYHEGLPTTRGTRYIAVSFVDP 727
>BC037169-1|AAH37169.1| 758|Homo sapiens procollagen-lysine,
2-oxoglutarate 5-dioxygenase 2 protein.
Length = 758
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH HEGL V NGTRYI +SF+DP
Sbjct: 731 HPGRLTHLHEGLPVKNGTRYIAVSFIDP 758
>BC016834-1|AAH16834.1| 210|Homo sapiens PLOD2 protein protein.
Length = 210
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH HEGL V NGTRYI +SF+DP
Sbjct: 183 HPGRLTHLHEGLPVKNGTRYIAVSFIDP 210
>BC016657-1|AAH16657.1| 727|Homo sapiens procollagen-lysine 1,
2-oxoglutarate 5-dioxygenase 1 protein.
Length = 727
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYI +SFVDP
Sbjct: 700 HPGRLTHYHEGLPTTRGTRYIAVSFVDP 727
>AL096840-6|CAC19722.1| 727|Homo sapiens procollagen-lysine 1,
2-oxoglutarate 5-dioxygenase 1 protein.
Length = 727
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYI +SFVDP
Sbjct: 700 HPGRLTHYHEGLPTTRGTRYIAVSFVDP 727
>AF490527-1|AAM12752.1| 727|Homo sapiens lysyl hydroxylase protein.
Length = 727
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH+HEGL T GTRYI +SFVDP
Sbjct: 700 HPGRLTHYHEGLPTTRGTRYIAVSFVDP 727
>AB209879-1|BAD93116.1| 796|Homo sapiens procollagen-lysine,
2-oxoglutarate 5-dioxygenase 2 isoform b variant
protein.
Length = 796
Score = 55.2 bits (127), Expect = 2e-07
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +2
Query: 2 HPGRLTHFHEGLLVTNGTRYIMISFVDP 85
HPGRLTH HEGL V NGTRYI +SF+DP
Sbjct: 769 HPGRLTHLHEGLPVKNGTRYIAVSFIDP 796
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,499,443
Number of Sequences: 237096
Number of extensions: 1174595
Number of successful extensions: 1663
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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