Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_O12
(663 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032730-1|AAH32730.1| 334|Homo sapiens dihydrodiol dehydrogena... 41 0.005
AB021933-1|BAA83490.1| 334|Homo sapiens dimeric dihydrodiol deh... 41 0.005
X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein. 31 2.8
D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding prote... 31 2.8
BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding pro... 31 2.8
AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding pro... 31 2.8
AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding pro... 31 2.8
AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding pro... 31 2.8
AK125239-1|BAC86095.1| 546|Homo sapiens protein ( Homo sapiens ... 31 4.9
>BC032730-1|AAH32730.1| 334|Homo sapiens dihydrodiol dehydrogenase
(dimeric) protein.
Length = 334
Score = 40.7 bits (91), Expect = 0.005
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 HHGIVANSIANNKDVFCEKPIAETVEDTKKCYEAAKAKGRVLYAAFNRRFDPAYRNLKNK 436
H V +A K V CEKP + ++ A+++ L A RF PA L++
Sbjct: 79 HKAAVMLCLAAGKAVLCEKPTGVNAAEVREMVAEARSRALFLMEAIWTRFFPASEALRSV 138
Query: 437 VRNGEVGHVQILKVTVRDS--PLPGVEYLKTSGGVFHDCLVHDFDMTSWVLG 586
+ G +G +++ + + +P +GG D ++ TS V G
Sbjct: 139 LAQGTLGDLRVARAEFGKNLIHVPRAVDRAQAGGALLDIGIYCVQFTSMVFG 190
>AB021933-1|BAA83490.1| 334|Homo sapiens dimeric dihydrodiol
dehydrogenase protein.
Length = 334
Score = 40.7 bits (91), Expect = 0.005
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 257 HHGIVANSIANNKDVFCEKPIAETVEDTKKCYEAAKAKGRVLYAAFNRRFDPAYRNLKNK 436
H V +A K V CEKP + ++ A+++ L A RF PA L++
Sbjct: 79 HKAAVMLCLAAGKAVLCEKPTGVNAAEVREMVAEARSRALFLMEAIWTRFFPASEALRSV 138
Query: 437 VRNGEVGHVQILKVTVRDS--PLPGVEYLKTSGGVFHDCLVHDFDMTSWVLG 586
+ G +G +++ + + +P +GG D ++ TS V G
Sbjct: 139 LAQGTLGDLRVARAEFGKNLIHVPRAVDRAQAGGALLDIGIYCVQFTSMVFG 190
>X80030-1|CAA56334.1| 790|Homo sapiens cap binding protein protein.
Length = 790
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 371 GRVLYAAFNRRFDPAYRNLKNKVRNGEVGHVQILKVTVRDSPLPGVEYL 517
G+ LY + D + N ++ ++ + HV +L+V D P P EYL
Sbjct: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYL 229
>D32002-1|BAA06769.1| 790|Homo sapiens nuclear cap binding protein
protein.
Length = 790
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 371 GRVLYAAFNRRFDPAYRNLKNKVRNGEVGHVQILKVTVRDSPLPGVEYL 517
G+ LY + D + N ++ ++ + HV +L+V D P P EYL
Sbjct: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYL 229
>BC001450-1|AAH01450.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 371 GRVLYAAFNRRFDPAYRNLKNKVRNGEVGHVQILKVTVRDSPLPGVEYL 517
G+ LY + D + N ++ ++ + HV +L+V D P P EYL
Sbjct: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYL 229
>AL445531-3|CAI15431.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 371 GRVLYAAFNRRFDPAYRNLKNKVRNGEVGHVQILKVTVRDSPLPGVEYL 517
G+ LY + D + N ++ ++ + HV +L+V D P P EYL
Sbjct: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYL 229
>AL162385-8|CAI12861.1| 790|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa protein.
Length = 790
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 371 GRVLYAAFNRRFDPAYRNLKNKVRNGEVGHVQILKVTVRDSPLPGVEYL 517
G+ LY + D + N ++ ++ + HV +L+V D P P EYL
Sbjct: 181 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYL 229
>AB209233-1|BAD92470.1| 803|Homo sapiens nuclear cap binding
protein subunit 1, 80kDa variant protein.
Length = 803
Score = 31.5 bits (68), Expect = 2.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 371 GRVLYAAFNRRFDPAYRNLKNKVRNGEVGHVQILKVTVRDSPLPGVEYL 517
G+ LY + D + N ++ ++ + HV +L+V D P P EYL
Sbjct: 194 GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYL 242
>AK125239-1|BAC86095.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ43249 fis, clone HEART2001756. ).
Length = 546
Score = 30.7 bits (66), Expect = 4.9
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -3
Query: 340 GIFHS--LSDGFFTEHIFVVSDGIGNDSMMVGSRSANDDNVYSLISLLQ 200
G++H L + EH+ V + IG + ++ G+R + D V++L+ L Q
Sbjct: 143 GVYHRNPLIRKYAAEHLSAVLEQIGAEKLLSGTRDSTDMLVHNLVRLAQ 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,007,532
Number of Sequences: 237096
Number of extensions: 1838235
Number of successful extensions: 3381
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3381
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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