Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_O09
         (557 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF096784-1|AAD22409.1|  361|Homo sapiens G protein-coupled recep...    29   1.0  

>AF096784-1|AAD22409.1|  361|Homo sapiens G protein-coupled receptor
           protein.
          Length = 361

 Score = 28.7 bits (61), Expect(2) = 1.0
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +3

Query: 183 YITILYIC*--SKKQNDKKTRLASRR-RASRDERNAPXKRYII*NKRKTMLFINSYIYCI 353
           Y  I  IC   +K+ ND++ R  S    +SR+  ++P +RY +   R T +F   ++  I
Sbjct: 223 YFHIFKICRQHTKEINDRRARFPSHEVDSSRETGHSPDRRYAMVLFRITSVFYMLWLPYI 282

Query: 354 IY 359
           IY
Sbjct: 283 IY 284



 Score = 22.6 bits (46), Expect(2) = 1.0
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 333 NSYIYCIIYVNEGGIIRVFIYKL 401
           NS+  C+IY    G+ R+ + +L
Sbjct: 309 NSFCNCVIYSLSNGVFRLGLRRL 331


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,662,304
Number of Sequences: 237096
Number of extensions: 714420
Number of successful extensions: 877
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)