Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_O06
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 81 1e-16
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 29 0.44
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.44
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.8
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 5.4
SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|... 25 7.1
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 25 7.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 7.1
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 9.4
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.4
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 9.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 9.4
>SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 81.4 bits (192), Expect = 1e-16
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Frame = +1
Query: 256 VCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGSMTFQEALKKRLDIIRP-SVTQ 432
V FD+DST+IQ E IDELA G EV +T+ AM G + FQE+L++R+ +++ SV
Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138
Query: 433 IREFLEKTPIYLTPGISQLVKELHERGVVVYLVSGGFRSLIEPVAERLNIPPSNVYANRL 612
I + + K I TPG QL L + G + + SGGF + E V +L++ YAN L
Sbjct: 139 INKVIGK--ITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDL--DYAYANVL 194
Query: 613 KFYFNGEY 636
+F +G++
Sbjct: 195 EFSDDGKF 202
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 29.5 bits (63), Expect = 0.44
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -1
Query: 371 LPPIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWT 225
LP + AVS +SS LP + S+S +S S+ K T S + SWT
Sbjct: 196 LPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSSLKKFYSWT 244
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.5 bits (63), Expect = 0.44
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = -1
Query: 347 SLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWT 225
SL +SS +LASSSI SS + ST+ + ++ NS T
Sbjct: 128 SLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTT 168
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = -1
Query: 359 ASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWT 225
A++ SL +SS +LASSSI SS + ++S T S++ ++S T
Sbjct: 114 ATSSSLASSSTTSSSLASSSITSSSL---ASSSITSSSLASSSTT 155
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 359 ASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWTVCCGDIT 204
+S S ++SP +L SSS SS + ST+ + ++ S ++ IT
Sbjct: 94 SSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSIT 145
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = -1
Query: 365 PIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWTVCCGDITLMETND 186
P +S+ S LTSS +L++SSIPS+ + STS S+ +++ + +++ ++
Sbjct: 222 PSSSSSSTLTSS----SLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSS 277
Query: 185 S 183
S
Sbjct: 278 S 278
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.8 bits (54), Expect = 5.4
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 392 NASWKVILPPIASAVSLLTSSPLPQNLASSSIPSSC-ITVESTSK 261
NAS VI P + + V T SP P + + IPSS +++ES+ K
Sbjct: 582 NASPSVIPPRVPTPVPGRTLSPKPTRI-PTPIPSSLNVSLESSKK 625
>SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 572
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 505 ERGVVVYLVSGGFRSLIEPVAE--RLNIP 585
+R VVV++ G F+ ++ V++ RLN+P
Sbjct: 441 KRNVVVFVGDGSFQETVQEVSQMVRLNLP 469
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.4 bits (53), Expect = 7.1
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Frame = +1
Query: 181 TLSLVSISVMSPQQT---VQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLT 351
TLS++ P+ T VQ +F + + +DS + +GI + A + K +
Sbjct: 226 TLSVMITDTKQPKSTKKLVQGVFELKERLPTVIDSIIDAIDGISKSAVLALTSESDKNSS 285
Query: 352 AEAMGGSMTFQEALKKRLDIIRPSVTQI 435
A+ +G + + L + L + S+ ++
Sbjct: 286 AKKLGEFIVLNQKLLECLGVSHYSIDRV 313
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 389 ASWKVILPPIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQT 255
+S + +PP +++ + SSPLP S + +S T S+S T
Sbjct: 201 SSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.0 bits (52), Expect = 9.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 46 FTTDNISINIKEQCY 90
FT N+S+N+K C+
Sbjct: 640 FTNSNVSVNLKSNCF 654
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.0 bits (52), Expect = 9.4
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -1
Query: 365 PIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNS 231
PI+S+++ SS +++SSS SS ++ S +T SA N++
Sbjct: 166 PISSSITSSISSSASSSVSSSSASSSG-SISSADAKTVSASSNST 209
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 25.0 bits (52), Expect = 9.4
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = +1
Query: 88 YGFTIV*LFEE------DATTMALYSLKNNLQYATLKTLSLVSISVMSPQQTVQELFRTA 249
+GFTI ++ E M L NNL ++ L+ + SV++ ++T+ ELF A
Sbjct: 150 FGFTIFIIYRELRYYVIFRHAMQSSGLYNNLPSSSTMLLTELPNSVLNDEETLHELFPNA 209
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.0 bits (52), Expect = 9.4
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 458 GVFSKNSLI*VTLGLMMSSRFFNASWKVILPPIASAVSLLTSSPLPQNLASSSIPSSCIT 279
G S S+ +G SS +F S P +S+ S +SSP + SSS S +
Sbjct: 125 GTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSPSSSSSKSSSSSKSSSS 181
Query: 278 VESTSKQTQSA 246
S+SK + S+
Sbjct: 182 SSSSSKSSSSS 192
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,522,250
Number of Sequences: 5004
Number of extensions: 48281
Number of successful extensions: 178
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -