Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0002_O06
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 146 9e-36
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 146 9e-36
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 141 3e-34
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 141 3e-34
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 31 0.53
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 30 1.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 30 1.6
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 28 6.6
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 28 6.6
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 27 8.7
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 146 bits (355), Expect = 9e-36
Identities = 73/143 (51%), Positives = 96/143 (67%)
Frame = +1
Query: 217 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGSMTFQEALK 396
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM G+ F++AL
Sbjct: 46 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALA 105
Query: 397 KRLDIIRPSVTQIREFLEKTPIYLTPGISQLVKELHERGVVVYLVSGGFRSLIEPVAERL 576
RL +++P+ Q+ +F+ + LT GI +LV LH RG VYLVSGGFR LI PVAE L
Sbjct: 106 ARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAELL 165
Query: 577 NIPPSNVYANRLKFYFNGEYAGF 645
I S +YAN + F G+Y GF
Sbjct: 166 GIEKSRIYANEILFDKFGKYHGF 188
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 146 bits (355), Expect = 9e-36
Identities = 73/143 (51%), Positives = 96/143 (67%)
Frame = +1
Query: 217 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGSMTFQEALK 396
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM G+ F++AL
Sbjct: 43 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALA 102
Query: 397 KRLDIIRPSVTQIREFLEKTPIYLTPGISQLVKELHERGVVVYLVSGGFRSLIEPVAERL 576
RL +++P+ Q+ +F+ + LT GI +LV LH RG VYLVSGGFR LI PVAE L
Sbjct: 103 ARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAELL 162
Query: 577 NIPPSNVYANRLKFYFNGEYAGF 645
I S +YAN + F G+Y GF
Sbjct: 163 GIEKSRIYANEILFDKFGKYHGF 185
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 141 bits (342), Expect = 3e-34
Identities = 73/145 (50%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
Frame = +1
Query: 217 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGSMTFQ--EA 390
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM G+ F+ +A
Sbjct: 47 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDA 106
Query: 391 LKKRLDIIRPSVTQIREFLEKTPIYLTPGISQLVKELHERGVVVYLVSGGFRSLIEPVAE 570
L RL +++P+ Q+ +F+ + LT GI +LV LH RG VYLVSGGFR LI PVAE
Sbjct: 107 LAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAE 166
Query: 571 RLNIPPSNVYANRLKFYFNGEYAGF 645
L I S +YAN + F G+Y GF
Sbjct: 167 LLGIEKSRIYANEILFDKFGKYHGF 191
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 141 bits (342), Expect = 3e-34
Identities = 73/145 (50%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
Frame = +1
Query: 217 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGSMTFQ--EA 390
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM G+ F+ +A
Sbjct: 30 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDA 89
Query: 391 LKKRLDIIRPSVTQIREFLEKTPIYLTPGISQLVKELHERGVVVYLVSGGFRSLIEPVAE 570
L RL +++P+ Q+ +F+ + LT GI +LV LH RG VYLVSGGFR LI PVAE
Sbjct: 90 LAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAE 149
Query: 571 RLNIPPSNVYANRLKFYFNGEYAGF 645
L I S +YAN + F G+Y GF
Sbjct: 150 LLGIEKSRIYANEILFDKFGKYHGF 174
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 335 SSPLPQNLASSS-IPSSCITVESTSKQTQSAVRNNSWTVCCGDITLMETNDSV 180
SSP L++SS IPS T +S Q QS V NNS + L T D V
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNSDLDADTSVNLSITTDGV 883
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 31.5 bits (68), Expect = 0.53
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 335 SSPLPQNLASSS-IPSSCITVESTSKQTQSAVRNNSWTVCCGDITLMETNDSV 180
SSP L++SS IPS T +S Q QS V NNS + L T D V
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNSDLDADTSVNLSITTDGV 883
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -1
Query: 377 VILPPIASAV--SLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWTV 222
VI+ PI + V L T SP+ +L+S+S PS+ +S Q+ ++V +TV
Sbjct: 1169 VIVQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNMSSIQSTTSVPGRRFTV 1222
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -1
Query: 377 VILPPIASAV--SLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNSWTV 222
VI+ PI + V L T SP+ +L+S+S PS+ +S Q+ ++V +TV
Sbjct: 1169 VIVQPITAQVITHLATPSPVSHSLSSNSSPSATTHSNMSSIQSTTSVPGRRFTV 1222
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 371 LPPIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNS 231
L P S +S LTS P P + SS S+ T Q+ S++ +++
Sbjct: 482 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESST 528
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 371 LPPIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNS 231
L P S +S LTS P P + SS S+ T Q+ S++ +++
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESST 735
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 371 LPPIASAVSLLTSSPLPQNLASSSIPSSCITVESTSKQTQSAVRNNS 231
L P S +S LTS P P + SS S+ T Q+ S++ +++
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESST 735
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -3
Query: 438 SDLSYTGPDDVQPLLQCFLEGHTAPHSFRGKPFNFISFATELGELVYTLVLYH 280
+DL P V PL +E H+ H G F F F +LG+ V+ + H
Sbjct: 1205 ADLPVGYPIYVSPLTTSHIESHSQIHKVFGPTFTFEGF-RQLGQNVWNRLRNH 1256
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 409 CPAASSMLPGRSYCPP 362
C A++ LP RSYCPP
Sbjct: 33 CGCAAASLPVRSYCPP 48
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 331 DEVKRLTAEAMGGSMTFQEALKKRLDIIRPS 423
D+VK +T E M G+M + RLD+ PS
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,893,400
Number of Sequences: 27780
Number of extensions: 268238
Number of successful extensions: 924
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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