Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_O03
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50199-3|AAA91263.1|  555|Caenorhabditis elegans Hypothetical pr...    99   2e-21
AM748820-1|CAO72174.1|  555|Caenorhabditis elegans hexosaminidas...    99   2e-21
U41532-1|AAF99904.3|  370|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U80027-3|AAC48131.1|  350|Caenorhabditis elegans Serpentine rece...    28   6.1  

>U50199-3|AAA91263.1|  555|Caenorhabditis elegans Hypothetical
           protein T14F9.3 protein.
          Length = 555

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
 Frame = +3

Query: 24  VIPLLGEKSTPVVWQEVFDEGVPLSNDTLIQVWK--PHEK-YEML-HILSKGHKVVYSSA 191
           ++  L  K  P+ WQEVFD  +P  N  +I +WK   HE+ YE + +I S+   V+ S+ 
Sbjct: 367 IVENLKLKRKPIFWQEVFDNNIPDPN-AVIHIWKGNTHEEIYEQVKNITSQNFPVIVSAC 425

Query: 192 WYLDHLMSGGDWTNFYLSDPRQMVRQY--SPT------ANVDNIVGGEACMWGEVVNDMN 347
           WYL+++  G DW +          R Y   PT      A  + + GG A +WGE+V++ N
Sbjct: 426 WYLNYIKYGADWRDEIRGTAPSNSRYYYCDPTNFNGTVAQKELVWGGIAAIWGELVDNTN 485

Query: 348 VISRIWSRASAVAERLWSPETEGLRYMNKVPNEVYSRLEEHTCRM 482
           + +R+W RASA AERLWSP  +  R       + + R+ E  CR+
Sbjct: 486 IEARLWPRASAAAERLWSPAEKTQR-----AEDAWPRMHELRCRL 525


>AM748820-1|CAO72174.1|  555|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 555

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 12/165 (7%)
 Frame = +3

Query: 24  VIPLLGEKSTPVVWQEVFDEGVPLSNDTLIQVWK--PHEK-YEML-HILSKGHKVVYSSA 191
           ++  L  K  P+ WQEVFD  +P  N  +I +WK   HE+ YE + +I S+   V+ S+ 
Sbjct: 367 IVENLKLKRKPIFWQEVFDNNIPDPN-AVIHIWKGNTHEEIYEQVKNITSQNFPVIVSAC 425

Query: 192 WYLDHLMSGGDWTNFYLSDPRQMVRQY--SPT------ANVDNIVGGEACMWGEVVNDMN 347
           WYL+++  G DW +          R Y   PT      A  + + GG A +WGE+V++ N
Sbjct: 426 WYLNYIKYGADWRDEIRGTAPSNSRYYYCDPTNFNGTVAQKELVWGGIAAIWGELVDNTN 485

Query: 348 VISRIWSRASAVAERLWSPETEGLRYMNKVPNEVYSRLEEHTCRM 482
           + +R+W RASA AERLWSP  +  R       + + R+ E  CR+
Sbjct: 486 IEARLWPRASAAAERLWSPAEKTQR-----AEDAWPRMHELRCRL 525


>U41532-1|AAF99904.3|  370|Caenorhabditis elegans Hypothetical
           protein F11D5.5 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -3

Query: 451 YTSFGTLFMYRRPSVSGLHNLSATALALDHILLITFISLTT 329
           +T F  LF YR+ ++ G+ N   TAL ++  L+IT  SL T
Sbjct: 131 FTCFNELF-YRQTTILGVENSICTALNIN--LIITIFSLPT 168


>U23484-9|AAC46771.1|  304|Caenorhabditis elegans Hypothetical
           protein EEED8.11 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = +1

Query: 106 PSSKFGNHMKNMRCYTS*VKVTKSSTHPLGTSTI*CQAVTGLTSTCQIHGRWCASTAPPP 285
           PSS  G H  +  C T   K T + +    T T      T  T+T         +T P P
Sbjct: 36  PSSYHGGHHNDDDCTTKPPKSTSTPSTSTSTPTTTTTTTTTTTTTPTTTTTTTTTTTPEP 95

Query: 286 TLT 294
           T T
Sbjct: 96  TTT 98


>U80027-3|AAC48131.1|  350|Caenorhabditis elegans Serpentine
           receptor, class j protein7 protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 391 LSATALALDHILLITFISLTTSPHIQASPPTILSTLA 281
           LSAT+L L   L +T +  T  P + +  PT++S  A
Sbjct: 236 LSATSLRLQRQLFVTLVVQTCIPIVASFLPTVISWYA 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,550,233
Number of Sequences: 27780
Number of extensions: 343476
Number of successful extensions: 918
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)