Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_O03
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    26   0.26 
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    26   0.34 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.45 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.6  

>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 229 LTSTCQIHGRWCASTAPPPTLTI*SEVKLVC 321
           L S C+IHG   A+TA PP L     V  +C
Sbjct: 438 LGSACRIHGS-PATTAAPPQLPTEESVDALC 467


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
 Frame = +3

Query: 6   ALFMENVIPLLGEKSTPVV----WQE---VFDEGVPLSNDTLIQVWKPHEKYEMLHILSK 164
           ++F ++  P+L  K + VV    W+E   V DE + + ND ++Q      + +   IL+K
Sbjct: 363 SMFNDSGNPILKAKPSEVVQILGWKELPNVGDEILEVENDKILQEVIKFRQKQRAEILAK 422

Query: 165 GHK 173
            HK
Sbjct: 423 EHK 425


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 33   LLGEKSTPVVWQEVFDEGVPLSNDTLIQVWKP 128
            L GE+  PV++   FD  V    DT  + W P
Sbjct: 1125 LEGEQKDPVIFSTSFDSKVMTRPDTDSENWTP 1156


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 455 ASRRAHVSYEPDAGSTHNPQADPASCIALPNSY 553
           AS  +H+S      + H+P   P++   LP SY
Sbjct: 284 ASHHSHLSSALGRSACHSPGVYPSTAGFLPPSY 316


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 24  VIPLLGEKSTPVVWQEVFDEGVPLSNDTLIQVWKPH 131
           ++P +   +TPV  QE+    +  S D     WK H
Sbjct: 390 IVPPISGSATPVFHQEMALYYLKPSYDAQEPAWKTH 425



 Score = 21.0 bits (42), Expect = 9.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 358 LLITFISLTTSPHIQASPPTILSTLAVGLYWR 263
           LL  F S+ T+P  QA    + S  AV   WR
Sbjct: 832 LLRYFASIATNPKEQAQLNLLASDPAVYEDWR 863


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 186 SAWYLDHLMSGGDWTNFYLSD 248
           S WYL+H  +  +  N+++ D
Sbjct: 206 SGWYLNHDYNLENKLNYFIED 226


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 346 FISLTTSPHIQASPPTILSTLAVGLYW 266
           FI    +P +   PP IL      L W
Sbjct: 323 FILYLATPFVPVEPPDILMPALTWLGW 349


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,341
Number of Sequences: 438
Number of extensions: 4276
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)