Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0002_O02
         (619 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   9.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 310 IILTLFQRG*HILSQYILFISQLLHICRIT*YHFIRE 200
           ++LT      HILS+Y L  S  L+    T Y  ++E
Sbjct: 17  LLLTNADNSVHILSKYQLITSTTLNWLPRTHYDHLKE 53


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 90  VIYGAFVLKNRN 55
           ++YGAF +++RN
Sbjct: 314 IVYGAFNIRDRN 325


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 158 TPYNKPIQDQRFERLSDEVILSDPTNVQ 241
           +PY+ P  D   E L    +L+DP+  Q
Sbjct: 327 SPYHTPEPDCIHELLGHMPLLADPSFAQ 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,168
Number of Sequences: 438
Number of extensions: 3261
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)